| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4237 |
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| Symbol | |
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| ID | 8744865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | + |
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| Start bp | 506230 |
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| End bp | 508761 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646514782 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003405729 |
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| Protein GI | 284167451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.28007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCAT CGGGTTCTTC GGGGGATGTC TATGCTGAAA CGCTCGCCGT CTTCGACCAG
CGCGACGATC CCTATGAACC ATTCACGACG CCAGAGGTGG CAGACTCGCT CAATACCGCC
AGACGAACTG TCTACAAACG CTTGGAGAAG CTGGTGAACC GCGGTGATCT AAAGACGAAG
AAGGTAGGTG CCAACGCCCG GATCTGGTGG AAATCAACAA GCCCGCCCGG AAATCACACA
CCAAAGAAGG CAAAGCACCA GCGTACCGAG TTTGAATCTA TCGTCGAAAA CGTGCTGGAA
CGAAATACGG ATGGATTCTA CAGCCTCGAC GAAGACCTTC AATTCACGTA TGTAAACACC
CGAACGGAAG AGCTACTGGA CTTGGAGGAG TCCGCTGTTC TTAGTCAGAA CATTCACGAT
ACACCCCTCT TGACTGATGC GTTCGAGGCT GCGCTTCACG AGGCGTCCGA GACCCGGGAG
CCTGTCATTG TAGAAGACTA CTACGCCCCA TTCGAGGTGT GGTTCGAGAA CGCCATTTAC
CCATCAGAAA CGGGTCTGTC GGTCTACTTC CGAGATATTT CGGACCGAAA GCGCTTGGAA
CACGACCTTC AAACGGAGCG AGACCACTTC CGCGTAGTAA TCGAAAATTC ACCGATCGTT
GCATTCCGAA TGGACTCGGA CCTGCGGTAC ACCTGGCTTT ACAACCCGGA CCAGGACTTC
GAAGATGTAG ACGTAACGGG CAAACGCGAT GATGAGCTAT TACCGCCTGA GACGGCAGAA
ATGCTCATGG CCCCGAAGCG AGCCGCTCTC GAAACGGGCG AGCAGGTCCG AGAGGAACGG
ACCTACGAGT TACCGAGTGG TGAGGTCACG TACGATCTCA CGGTTGAACC TGACCGCGAC
GAAACGGGTG AGATCGACGG CATATCGTGT GTCGCCGTGG ATATTACCGA CCAAAAGCAG
CGCGAACGAG ATCTCAAACG CTACGAGCGG ATTGTCGAGA CCGTCCCGGA CGGCGTCTAC
GCCCTGGATT CCGACGACCG GTTCATCCTC ATCAATCAGG CGTTCTGTGA GCTCGTGGGA
TACGACCGCG AGACGCTGCT GGGCGCTCAC TCCACGCTGA TCGAGAACCA GGCAGTGAAC
GATACTGCGA ACGCCCTCCA GGCGGAGATC CAGGCAGGTG AGCGCGATGT CGGCGTGATC
GAAGCAAAGT TCGAAACCGC CACCGGTGAG ACGGTTCCGG TGGAGAGCCG AATCGCCCCA
TTCGAGCACG CCGATGGCCG CGTCGGTCGG TGTGGGGTCG TCCGCGACGT CACCGAGCAG
ATACGACGAG AAGAGGAACT CACCGCGCTG AACCGCCTCA ACTCTGTGTT TCAGGACGTC
ACACACGCTA TTGTTGAGTC GTCCTCACGT GAGGAGATCG AGCAGACGAT CGCAGAGCAC
CTCACGAACT CCGACTCCTA TGAGTACGCC TGGATAGGCC ACCTCGACCG GCACGGCGAA
AGAATCCTCC CACAGATCGT CGGTACGAAC GATGTCGAGC TCCCCGAGAT ACCTCTCTCC
TCCGCGACCG ATAATTCGAC GAGTTACCCA CCGGCCGCTG AAGCAATGCG GACCGGAAGA
GTTCAGGTCA CAGACGATAG CATCGCCGAT CCCGTGCTTA ACCAGTGGAA GCAGTCCCAA
GACATCCGCC ACCGGGCGGG AATTTCAATT CCGATTGCCT ATGAAGAGCG CGTCCACGGC
GTCCTAAATG TCTACACGGC GCGAGAGAAC GCATTCGATG AAAACGAACG CCGCATCGTG
AGACGAATCA GTGAGGTCGT TGGGCACTCA ATCAGTGCAA TCGAACGGAA GCGGGCCCTA
CTGGAAGACC GCGTCCACGA AATCACGTTC CGATCTCACC GGTTTACAGA GACCCTCACC
GATGCTGCTG GTGACGAGTC GTTCACCGTC TCTATCGAGA AGTCCGTTGC GCTCCCTGAC
GACCAGAGCA TCGCATACTA CTCTCTCGAT GGGCTTGATC CGGCGGTTTT CATTGACGTC
ATCGAACAGT ACAATCCCGA CGGTGAGTAC CACGTGACCG ACGAGGAAGG GTCTCGGGCT
CGCGTCGAAG TCCAACAGAG TAACTTGACG CTTGCAGCCG AACTCGCCAA GTACAACAGC
TGGATTGCAG ACGGAACTCT CCAGAACGGG GAGTTTCGAC TCAGAGTCCA AGTGCCACAA
TACGCCCAAG TCCGAGAGGT GAAAGACATC GTTACGGAAG CGTATCCGGA CGTCGAGGTC
CTCGCACAAA TTGAAGTCGA GCGAGAAAGT ACACGTCTGA GTGATGTCTT TTCTGACCTA
GACGACCAAT TGACCGAGCG ACAGCGGACT GCGCTGGAAG TAGCGTACTA CTCGGGGTAT
TTCGATTGGC CACGCGCAAT TACGGGTGAA GAGTTAGCCG AGCGGTTAGA TGTAACTCCA
GGCACTGTCT CCCATCACCT TCGGCACGGA GAACACAAGT TACTGTCCGC ATTTTTTGAC
CTCGCAGAGT AG
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| Protein sequence | MSSSGSSGDV YAETLAVFDQ RDDPYEPFTT PEVADSLNTA RRTVYKRLEK LVNRGDLKTK
KVGANARIWW KSTSPPGNHT PKKAKHQRTE FESIVENVLE RNTDGFYSLD EDLQFTYVNT
RTEELLDLEE SAVLSQNIHD TPLLTDAFEA ALHEASETRE PVIVEDYYAP FEVWFENAIY
PSETGLSVYF RDISDRKRLE HDLQTERDHF RVVIENSPIV AFRMDSDLRY TWLYNPDQDF
EDVDVTGKRD DELLPPETAE MLMAPKRAAL ETGEQVREER TYELPSGEVT YDLTVEPDRD
ETGEIDGISC VAVDITDQKQ RERDLKRYER IVETVPDGVY ALDSDDRFIL INQAFCELVG
YDRETLLGAH STLIENQAVN DTANALQAEI QAGERDVGVI EAKFETATGE TVPVESRIAP
FEHADGRVGR CGVVRDVTEQ IRREEELTAL NRLNSVFQDV THAIVESSSR EEIEQTIAEH
LTNSDSYEYA WIGHLDRHGE RILPQIVGTN DVELPEIPLS SATDNSTSYP PAAEAMRTGR
VQVTDDSIAD PVLNQWKQSQ DIRHRAGISI PIAYEERVHG VLNVYTAREN AFDENERRIV
RRISEVVGHS ISAIERKRAL LEDRVHEITF RSHRFTETLT DAAGDESFTV SIEKSVALPD
DQSIAYYSLD GLDPAVFIDV IEQYNPDGEY HVTDEEGSRA RVEVQQSNLT LAAELAKYNS
WIADGTLQNG EFRLRVQVPQ YAQVREVKDI VTEAYPDVEV LAQIEVERES TRLSDVFSDL
DDQLTERQRT ALEVAYYSGY FDWPRAITGE ELAERLDVTP GTVSHHLRHG EHKLLSAFFD
LAE
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