| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4205 |
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| Symbol | |
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| ID | 8744833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | + |
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| Start bp | 474780 |
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| End bp | 475604 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646514752 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003405699 |
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| Protein GI | 284167421 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.768044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATGA CTAATGACTT CGCTATCGAC GGCAAGGTGT GCGTGATAAC GGGCGGGTCC
GGCGAACTCG GATCGGCAAT GGCGAAAGCG ATCGGTGAAA ACGGCGGGAA GGTCGTTCTC
CTCGCCCGCG GTGAAGAAAA ACTACAGCAA ACCAGCGCCG AACTCGCGGA ACAGGACATC
GAACACAGCG CGATCCCGGC GTCGGTTCTC GACCGCGCGG AACTGGACGC GGCCGCCGAG
ACAGTCATCG ACGAATACGG TCGCATTGAT GTTCTCATCA ATGCAGCAGG AGGAAACAAC
CCCGATGCGA CGACAGGTCC AGATACGTCC TTTTTCGAAC TCCCGAAAGA AGGCCTCGAA
GACGTCGTGA ACGTCAACTT CGTCGGGACG GTCCTCGCGT CGCAGGCCTT CGGCGAGTAC
ATGGTCGAAC AAGGAGAGGG TAGTATTCTG AACGTCTCGT CGATGAACGC GTTTACGCCG
CTGACCAAGA TTCCGGGCTA TTCGGGTGCC AAAGCTGCCG TCTCGAACTT TACCGAGTGG
CTGGCCGTCC ATATGGCTCA GAACTACACT CCCGATATTC GCGTCAACGC GATTGCACCC
GGGTTCTTCC TTACGGAACA GAACCGCTAT CTCTTGATCG ACGAAGAGAT GGACGAGTAC
ACCGACCGCG GTCAGGCGAT CATCGATCAC ACTCCCCAAC GACGATTCGG TACTCCGAAG
GACCTTGCGA CGACCGTGCT TTGGCTGATC GCACCCGGTT CCGAATTCGT CACTGGGACG
GTGATTCCGG TCGACGGGGG GTTCTCGGCG TTTAGCGGCG TCTGA
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| Protein sequence | MSMTNDFAID GKVCVITGGS GELGSAMAKA IGENGGKVVL LARGEEKLQQ TSAELAEQDI
EHSAIPASVL DRAELDAAAE TVIDEYGRID VLINAAGGNN PDATTGPDTS FFELPKEGLE
DVVNVNFVGT VLASQAFGEY MVEQGEGSIL NVSSMNAFTP LTKIPGYSGA KAAVSNFTEW
LAVHMAQNYT PDIRVNAIAP GFFLTEQNRY LLIDEEMDEY TDRGQAIIDH TPQRRFGTPK
DLATTVLWLI APGSEFVTGT VIPVDGGFSA FSGV
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