| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4183 |
|---|
| Symbol | |
|---|
| ID | 8744811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 451821 |
|---|
| End bp | 452897 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646514731 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003405678 |
|---|
| Protein GI | 284167400 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.708738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAC TCGATTACCT TCGACAGCGG AATACGCCGC GAACTGGAAA CCAGATCCTC
TCGAGATCGG GACGGCTCAC GTTGCTAGTG GGGATCGCCA TCCTCGCCGC GCTGGGGCCA
GTCGTCCAGT CGGTCCAGCC GTTCTGGCTG AATCTCCTGG TTCGGATGTT GACCTTCGCT
CTCCTGGCGC TGAGCCTCGA CTTCGTCTTC GGCTACGCGG GACTGCTGTC GTTCGGCCAC
GCCGCGATGT ACGGTGCCGG CGGGTACGCT GCGGCGCTGT TGGTCACGGA GGTGACCGCG
AGTGCACTGG TCGTCCTACC GCTCGCGGTC GTCACCGGCG TCATCGTGGC CACGATAATC
GGCTGGCTCA GCGTGCGGGC TCGCGGAATC TACTTCGCTA TGCTGACGCT GGCGTTCGCA
CAGATGCTCT ACGTCGTCGC GTTCACGGAC CTACCGGCAA CGATCGCCGG AATGGAGACG
GTGACCGGCG GCGATAACGG TCTCTACGGC ATTCAGCTGT ACGAGCTGTT CGGGATCGAC
TTTCGGGAGC GGCTCAACTA CTACTACTTG ACCCTCGGGA TCGTGGCGCT ATCGCTGGCC
GGGATAGTCC GGCTCGCCAA CTCCCCGTTC GGCCGCGTCC TGCAGGGCAT TCGCGAGAAC
GAAGAACGAA CGGAATTCAT CGGCTACGAC GTCCAGCGCT ACAAGGTCAT CGCGTTCGCG
ATCAGCGGCG GCTTCGCCAG TCTCGCCGGC GCGCTCTACG TGCCGTTCCA GAGCGTCGCT
AACCCCCAAC TGCTCCACTG GACGGTCAGC GGAGAACTCG TCGTGATGGT CCTACTCGGC
GGCATGGGCA CGTTCTGGGG CCCGATGCTC GGGGCCGGAC TCGTCGTCTT TCTCGAGGAT
CGTCTCGGCA GCGTCGCGAG CTGGGAAGTT ATCCTCGGCA GCCTGTTCGT CGCGGTCGTC
GTCTTCGCCC CGCGTGGACT CGCCGGGTCG ATCATCACGC TCCGAAACGA TCCTCGTGCC
GCCATCGGAA ACGCGAAGCG AGCGCTCGAA AACTACGTGC GGAAGGTGAG AGGATAA
|
|---|
| Protein sequence | MSALDYLRQR NTPRTGNQIL SRSGRLTLLV GIAILAALGP VVQSVQPFWL NLLVRMLTFA
LLALSLDFVF GYAGLLSFGH AAMYGAGGYA AALLVTEVTA SALVVLPLAV VTGVIVATII
GWLSVRARGI YFAMLTLAFA QMLYVVAFTD LPATIAGMET VTGGDNGLYG IQLYELFGID
FRERLNYYYL TLGIVALSLA GIVRLANSPF GRVLQGIREN EERTEFIGYD VQRYKVIAFA
ISGGFASLAG ALYVPFQSVA NPQLLHWTVS GELVVMVLLG GMGTFWGPML GAGLVVFLED
RLGSVASWEV ILGSLFVAVV VFAPRGLAGS IITLRNDPRA AIGNAKRALE NYVRKVRG
|
|---|
| |