| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4151 |
|---|
| Symbol | |
|---|
| ID | 8744779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 419581 |
|---|
| End bp | 420663 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646514700 |
|---|
| Product | isopentenyl-diphosphate delta-isomerase, type 2 |
|---|
| Protein accession | YP_003405647 |
|---|
| Protein GI | 284167369 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAC GGCCCTCGTC GGAGACCGAA GATCGAAAAG ACGACCACAT TCGGATCGTT
CAGGAACGGG ACGTCGAAAC CACGGGAACG GGCTTCGAAG ACGTCCAGCT CGTCCACGAA
GCGCTTCCGG AACTCCATTA CGACGCTATC GATACGTCCG TCGAATTTCT GGACCACGAG
TTATCCGCTC CGATCTTCAT CGAAAGCATG ACCGGGGGGC ATCAAAACAC TACAGAAATC
AATCGTGCAC TGGCTCGCGC TGCCGGCGAG ACGGGCATCG CGATGGGGCT CGGAAGCCAG
CGAGCGGGCC TCGAGCTCGA CGATAACGGC GTCCTCGAAT CGTATACCGT CGTCCGTGAC
GCCGCACCCG ACGCGTTCAT CTATGGAAAT CTTGGTGCAG CACAACTTCG AGAGTACGAT
CTCGAAACGG TTGAGCGCGC AGTGGAGATG ATCGAGGCGG ACGCGCTCGC AGTCCACCTG
AACTTCCTCC AAGAAGCCGT CCAACCCGAA GGCGACGTCG ACGGCCGGGA CTGTCTGGCG
GCCATCAAAC GAGTAGTTGA GGATCTCTCT GTGCCGATCA TCGTTAAAGA AACGGGTAAC
GGAATTTCAG GAGAGACTGC CCGAAAGCTA TCCGAGGTAG GCGTTGACGC GATCGATGTC
GCTGGAAAAG GCGGTACGAC GTGGTCCGGG ATCGAGGCCT ACCGCGCGGC TGCGGCGAAC
GCACCGCGGC AGAAACGAAT CGGTGCGCTG TTCCGGGAGT GGGGAATCCC GACCGCTGCG
AGCACGACCG AGTGTGTCGC CGAACACGAC TGCGTAATTG CGAGCGGCGG TGTACGGACG
GGATTGGACG TAGCAAAAGC GATCGCGTTA GGTGCACTCG CCGGTGGGTT GGCAAAACCG
TTCCTGAATC CGGCCACTAA CGGCTCGGAC GCTGTCATTG AGCGAGTTGA GGATCTGATC
GCCGAGCTAC GGACAGCAAT GTTTGTCACC GGTTCGAAGT CAATCCCAGA CCTTCAGCAT
ACGGAGTACG TGTTGCAGGG AGAAACGCGC GAATACATCG CCCAACGGAC CAGCGGAGAG
TAG
|
|---|
| Protein sequence | MTERPSSETE DRKDDHIRIV QERDVETTGT GFEDVQLVHE ALPELHYDAI DTSVEFLDHE
LSAPIFIESM TGGHQNTTEI NRALARAAGE TGIAMGLGSQ RAGLELDDNG VLESYTVVRD
AAPDAFIYGN LGAAQLREYD LETVERAVEM IEADALAVHL NFLQEAVQPE GDVDGRDCLA
AIKRVVEDLS VPIIVKETGN GISGETARKL SEVGVDAIDV AGKGGTTWSG IEAYRAAAAN
APRQKRIGAL FREWGIPTAA STTECVAEHD CVIASGGVRT GLDVAKAIAL GALAGGLAKP
FLNPATNGSD AVIERVEDLI AELRTAMFVT GSKSIPDLQH TEYVLQGETR EYIAQRTSGE
|
|---|
| |