| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4113 |
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| Symbol | |
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| ID | 8744741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | + |
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| Start bp | 377579 |
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| End bp | 380269 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646514667 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003405614 |
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| Protein GI | 284167336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTG TCTCCCTATC GCCCAAACAG GTTTTAGAGG TGTTTGAAAC CCTCGCACCC
CCCGGGACAC CGCTGACGAC CCCAGAAGTC GCCGCCGAGT TCGACTGTAG CCACCGGACC
ATCTATAACA AACTAGAGAC ACTCGTCAAC AACGGCTCAC TCGAAACGAA GAAAGTCGGA
GCACGTGGTC GCGTATGGTG GCGACCCCTA CAGGAATGCG ATCATGAGGA TGAAGACGAA
GACGAGCGGT TCTATCAATC ATTGTTCGAT TCGATCGACA AGGGCATCTT CCTCGCAGAC
GTGATCTTCA ACAGGGATGG CGAACCGATA GACGTCCTCT ATCGTGAGGC CAATACAGCA
GCAACGGAAA TGGTCGGCGA AAACTTCGAA GGCCGCTTCT TAACCGAGAT TGATCTAGGG
TACGAGGACC ATTGGTACGA GACCTTCGGC CGGGTGACTA GCACCGGCGA GGGAGAACGT
CTTGAAGTAT ATGCGGAACC GGATGGGCAC TGGTATGACG TCTACGTGTT CAAGCCGCCG
AACGACGGCA ATCGGCGTAT CGGAATCATC TTCCAGGATA TCACCGAGCG CAAGCGTGCC
CGACAGAAAT TGGAAGAAGA ACGGGATATG TTCGCCGACG GACCGACGGT CGTCTTCCGG
TGGACGCCCG AGGCCGATGA GGGATGGCCG GTCGAGTACG TCTCCGAAAA CGTCGAGGAC
GTGTTCGGGT ACACGCCTGC GGAACTCGAA TCCGGAGATA TCCCGTATAC CGACCTCCTC
CTCGATGAAG AACTCGACCG GATCGCCAGC GAGGTCGCGG AGAACAGCGA CGAAACGACC
GAGCGGTTCA GTCACGAGCC CTACCGGATC AAAACCAAAG GCGGTGACAT CCGGTGGGTG
AAAGACATCA CAAAGATCGT CCGGAACGGT TCCGGGAAGA TTGTCAACTA TCTTGGGTAC
CTTGTTGACA TCACCGAGCG CAAGCAGGCC GAGGAAACGC TGAAGCAAAC GAACCGATCG
CTCAAACGAC TCAATAGGGC GAGCGCCGAC CTGTTCGACG CCGAGCCGGA TGCCATCGCT
GACCGCGTCG CCGAACTTAC CCAGCATGTC CTCGACATCG AGTACGCCGC GCTGTGGCGC
TACGACGAGA CGACCGGCGA AATCCGGGAG TACGCCACCT CCGTCGATCC CGAACTGGAC
GCAGATAGCG TTACGCCTTC CGAGGGATTC CATAACCAGG TGTGGAAGAC CTTCATCAGT
AACGACGTAT CCGCCGATAC CGATCTTAAC GTCCCCAACA GCGGGGTGAT CGAAACAAAA
GCCCCACTGC GAAGTTGTGT TCTCGTCCCG CTGGGACGAC ACGGCGTCAT TTGTGCTGGT
TCGACGCGAG TCGAAGCGTT CAATGGCCGC GTGGCCGATC TCGCAGAGAC GGTCGCGGCG
ACGATTAAGG CCGCGTGGGA CCATGCCGAA GGCGAACAGC AGTTGACCGA CCGCAACGCG
GAACTCGAAC GTCTTGACAG ACTGAACGGG CTCATTAGGG GCATCGATCA GGCATTAGTG
GATGCTGAGA CACTCGAAGC GATCGACCAG TCCGTGTGTG AACTCCTCGC GGACTCCGAG
CTGTACGAGT TCGCCTGGAT CGGCGAGCGT GATCCAGGCT CTGACACAAT CCGGCCCAGA
GAGTGGGTCG GTGTCGATCA CGGCTACCTG GAAACACTGT CAATTTCGAC CGACCAGCAT
CCCTCAAACG AAGATCCTGT CGCCGCCGCC GTGCGAACAC AGCACGTGCA GGTGGTCGAA
GACGTTGCCA TCGACCCGCG TGCCGCCGAC TGGCGAGAAG CAACGCTCGA CCGCGGGGCG
CGCTCGTGTA TCAGCATTCC GCTGGTCTAC AACAGATCGC TATACGGTGT CCTGTCGGTA
TACGCCGCGC AGCCGAAACC CGACGAGCGC GATCATGCGG TGCTTGCCGA ACTCGGGGAG
ACGATTGCCC ACGCGATCAA CGCCGTCGAA ACCAGACGGA CGTTGTTGAC CGACAGCGTC
ACCGAGCTCA CGCTCGAAAT TCACGAGGCC GACGACGTCC TTACCAAACT CGCTCGGAAG
ACCGACACCG AGATCGAATT CGACGGGCTC GTTCCCCAGA GCGACGGTGC ACCCCACCTC
TTCTTTTCTG CGCATGATGT CATCGCCGAG GACGTGCTCG CTGCAGTACG ACACCTACCT
GAAGTAGCGG AGATAACGCT GATCAGGGAG GAGGAGTCAC GGTGCGTCTT CGAAGCAACG
GTCACCGAGT CCACACTCAT ATCATATGTC GAGAACGAAG GTGTCGTTCG CTCGCTTTCA
ACTACACCTG AAACAACCAC TCTTATCGTT GATCTCCCTG CAGCCGCGAC CGTTCGGGAG
TTCGTCGAAA CTATCCAAGA GATCTATCCA GGTACTGAAC TTGTGACTCG TCAGACATGT
GAACGGGAGA TTACGACGCG TCAGGACCTG CGCGACGCCC TCACTGAGCG GTTCACTGAC
CGACAACTCG AAATCCTGGA AACCGCCTAT CGGAGCGGGT TCTTCGAGTC ACCGCGCGTA
CGGACGGGGA AGGAATTGTC CGAGGCGCTG GGGATTACGC AATCGACGTT CTCCTACCAC
CTCCGGGAAG CCCAACGCCG TCTCTGTGAG ATAGTGTTCG AAAACTCCTG A
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| Protein sequence | MSSVSLSPKQ VLEVFETLAP PGTPLTTPEV AAEFDCSHRT IYNKLETLVN NGSLETKKVG
ARGRVWWRPL QECDHEDEDE DERFYQSLFD SIDKGIFLAD VIFNRDGEPI DVLYREANTA
ATEMVGENFE GRFLTEIDLG YEDHWYETFG RVTSTGEGER LEVYAEPDGH WYDVYVFKPP
NDGNRRIGII FQDITERKRA RQKLEEERDM FADGPTVVFR WTPEADEGWP VEYVSENVED
VFGYTPAELE SGDIPYTDLL LDEELDRIAS EVAENSDETT ERFSHEPYRI KTKGGDIRWV
KDITKIVRNG SGKIVNYLGY LVDITERKQA EETLKQTNRS LKRLNRASAD LFDAEPDAIA
DRVAELTQHV LDIEYAALWR YDETTGEIRE YATSVDPELD ADSVTPSEGF HNQVWKTFIS
NDVSADTDLN VPNSGVIETK APLRSCVLVP LGRHGVICAG STRVEAFNGR VADLAETVAA
TIKAAWDHAE GEQQLTDRNA ELERLDRLNG LIRGIDQALV DAETLEAIDQ SVCELLADSE
LYEFAWIGER DPGSDTIRPR EWVGVDHGYL ETLSISTDQH PSNEDPVAAA VRTQHVQVVE
DVAIDPRAAD WREATLDRGA RSCISIPLVY NRSLYGVLSV YAAQPKPDER DHAVLAELGE
TIAHAINAVE TRRTLLTDSV TELTLEIHEA DDVLTKLARK TDTEIEFDGL VPQSDGAPHL
FFSAHDVIAE DVLAAVRHLP EVAEITLIRE EESRCVFEAT VTESTLISYV ENEGVVRSLS
TTPETTTLIV DLPAAATVRE FVETIQEIYP GTELVTRQTC EREITTRQDL RDALTERFTD
RQLEILETAY RSGFFESPRV RTGKELSEAL GITQSTFSYH LREAQRRLCE IVFENS
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