| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4088 |
|---|
| Symbol | |
|---|
| ID | 8744716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 344316 |
|---|
| End bp | 346580 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646514648 |
|---|
| Product | Glycosyl hydrolase family 32 domain protein |
|---|
| Protein accession | YP_003405595 |
|---|
| Protein GI | 284167317 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC GAGACGATAG CGATGACTGC CGTGTCGTAG CGTACTGGCC GTTCGACGAA
AGCGAGGGCT CGTCCGCCGA GGAAGTCGTG TCCGGACGCC GGGATGCGAT CGAGCACGCG
TTCGCGGACG CACGGTTCAA ATCGGATAGT GATCCGCGGT GGATCGACGG CGTCACGGGA
AGCGGACTGT TGTTCGACGG TTACTCCACG CAAATCGAAC ACGACCGGCA GATTCTCGAC
GGAGAGACGA CCCGGCTCAC GGTCGAAGCG TGGATCGCCC CCCGCGCGTT CGAGGGTCAG
TCGTCAGAGC GTCTCTCCCC GATTATCAGC AACCACTCGG TCGACGATAA CCGCGGATTC
GAGTTTGGAC TCGACGGACA CGGCCGGTGC TCGTTCCAAG TCGGACTGGG AGACACGTGG
GTGGCTGTCC AGACGGAATC ACCGCTTCCC AAATATTCCT GGTCGCATGT CGCAGCAGTC
TTCGAGGGCG ACGACGGTAC ACTCCGACTC TACGTCGACG CCGCATGCAC TGCAGTGGAA
CGAGTTCCCG AGGGGAGCGT GATCTTCCCG GCCGACGTCC CGGTTCTGAT CGGAAAGAAC
AACCGAACCG AACGCGTCGA TGATACGTTC GCTTTACACA ACTTCGCAGG AGCGATCGAC
GAACTCAAAA TCTACGACTG CGCGTTCACC GCCTCCGACG TCCCCGAGCG GTACGAGACG
CCGTGTCACG ACGAACACCC CTCGATGAAC TACGAAACGA TCGCCCTCGA TCCGTCGCGA
TATCGCGGAG ATCGTCATCG TCCGCAGTAC CATCCGATCC CGCCCGGTCA CTGGATGAAC
GAACCGCATG CACCGCTGTA TCACGACGGT CAGTATCACC TGTTCTACCA GCACAACCCC
AGCGGACCGT ACTGGGGCAA TATCCATTGG GGGCACTGGG TGAGTGACGA TTTAGTCCAT
TGGCGGCACC TTAAACCGGC ACTGGCGCCC GAACGCGACG GACTGGCTCC CGACGGGATC
TGGTCCGGTG GGTCGACTCA CGACGCGGAC GGGGACCCTG TTCTCCTCTT TACCGCGGGA
GAAATAGACC GCACTCCCGA TCAGCGCGTC GTGGCAGCGT CTCCTGTTGA TCCCGACGAC
CCCGAATTGA CGTCTTGGCG TCAGGACGAC GAGTCCGCGA TCGAGCGCCC GCATTCGATC
GGGCTTCGGG ACAACGACTT TCGCGACCCG TTCGTCTGGC GGGAGAACGG GACGTGGTAC
TGTCTCGTCG GGTCCGGATT CGCTACCGGT GGCGGTGCGG CCCTCGTATA CGAGTCTGAG
AGCTTGGCGG AGTGGGTGTT CCGGGGCTGT CTCCATCGAA CGGATCACGA CGAGTACCCG
GAGCTCGGGC TCGTCTGGGA GTTGCCCGTC TTGCTGCCGA TCGGCGAAGA CGAGACCGAC
GCCGAGAAGT ATGCGTTCAT CGTCAGTCCG ATTGAGGGCG CCGCGGAAGT AGAAGTGTAC
TATTGGCTCG GCGAGTGGGA CCCCGACGCC TGTCGGTTCG TTCCGGACCA CGAGGACCCG
CGACGTATCG ATTACGGGGG GTTTCACTTC ACTGGTCCTC ACGGTATCGT CGACCCCGAA
ACGGGTCGGA GCCTCCTATT CACGATCGCA CAGGACGACC GTCGTCCGCG GGATCACTAC
GACGCCGGAT GGGCCCACAA CGGCGGTCTC CCGGTACACC TGTTTCTTCG CGACGACGGT
CGGCTCGGCA TCGAACCGAT CGAGGAACTG CGATCGCTCC GAGCCGAGCG ACTCGCCGAG
ATCCGGAACG CGCAGGTCTC AAATGCGAAC GACGAACTGG ACGGCGTTGG TGGAACCGCA
GTCGAGATTC GAGCAACAAT GGCGTCCGAC GGCGCTGAGA AGTACGGGCT GAAGGTAAGA
GCGAACCCTG ATGGGTCCGA GGAGACGCTG ATATATTACG ACGAACGGAC GGAGCGGATC
GTCGTCCACC GCGAACACAG CACTCGAAAC GCCGAAACAC GGGCGACTGT TTCGGAGCGA
AGCTCGCTCG TCCACCGTGG CGAGGTCAAC CGCGACGGCG AGGACCTCGA ACTACGAGTG
TACCTCGACG GGTCGATGCT CGAGGTATAC GTGAACAGCC TAAAGAGTGT CACTACTCGC
CTGTATCCGG AGGATGAGCG GTCGACCGGA ATCGAGGCGT GGGCGGACGG TGATGTGACC
GTCCAGCGAT TGGACGTCTG GGAACTGGAT AGCGCATACG AGTGA
|
|---|
| Protein sequence | MTDRDDSDDC RVVAYWPFDE SEGSSAEEVV SGRRDAIEHA FADARFKSDS DPRWIDGVTG
SGLLFDGYST QIEHDRQILD GETTRLTVEA WIAPRAFEGQ SSERLSPIIS NHSVDDNRGF
EFGLDGHGRC SFQVGLGDTW VAVQTESPLP KYSWSHVAAV FEGDDGTLRL YVDAACTAVE
RVPEGSVIFP ADVPVLIGKN NRTERVDDTF ALHNFAGAID ELKIYDCAFT ASDVPERYET
PCHDEHPSMN YETIALDPSR YRGDRHRPQY HPIPPGHWMN EPHAPLYHDG QYHLFYQHNP
SGPYWGNIHW GHWVSDDLVH WRHLKPALAP ERDGLAPDGI WSGGSTHDAD GDPVLLFTAG
EIDRTPDQRV VAASPVDPDD PELTSWRQDD ESAIERPHSI GLRDNDFRDP FVWRENGTWY
CLVGSGFATG GGAALVYESE SLAEWVFRGC LHRTDHDEYP ELGLVWELPV LLPIGEDETD
AEKYAFIVSP IEGAAEVEVY YWLGEWDPDA CRFVPDHEDP RRIDYGGFHF TGPHGIVDPE
TGRSLLFTIA QDDRRPRDHY DAGWAHNGGL PVHLFLRDDG RLGIEPIEEL RSLRAERLAE
IRNAQVSNAN DELDGVGGTA VEIRATMASD GAEKYGLKVR ANPDGSEETL IYYDERTERI
VVHREHSTRN AETRATVSER SSLVHRGEVN RDGEDLELRV YLDGSMLEVY VNSLKSVTTR
LYPEDERSTG IEAWADGDVT VQRLDVWELD SAYE
|
|---|
| |