| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4087 |
|---|
| Symbol | |
|---|
| ID | 8744715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 342986 |
|---|
| End bp | 344248 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646514647 |
|---|
| Product | Haloacid dehalogenase domain protein hydrolase type 3 |
|---|
| Protein accession | YP_003405594 |
|---|
| Protein GI | 284167316 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.158791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGTTT ATAGTCAGTT GTATGAGCTG TACGATAGTA CCGACACTGA GACGCTCAGG
GCACGTCAGG ATCTCGTCAA CGTGTTCCCG CCACTCGATT CACAAGTCTC CCTACAGCAG
TGGGAGTCCG TTCGAGACGA CCTCGACCAG CAGAAGACCC AGATTCGGCG GAGTTTCCCG
AACGGAGACG CCTACGCGGA GATCGCCGCA CACGCGACGG AAAGCCAGGC GTTCACCGCA
CTCGATCTGT ACAACAAGTA CGAACGTCCG ATCAACGCAC TGGTCCTCGA CGTCGACGAG
ACGCTCCGGT CGGCGTCAAC GACCGACAAC GAGATCCCGC GAGACACGCT ATACTTCCTG
ACGGAACTTC ACGAACGCGG CGTTCCGATC GTGATCTGTA CCGGGCAGAC CTTGGAAAAC
GTCAAGGGCT TCATGATACA AGGGCTCGGC AGCGAAATCG TCCACTCGGG CGACCTCTCG
ATCGTCTACG AGGCCGGAAC CGGCGTATTC ACACCTGAAC ACGGTGCGGA GACGAAGCGG
CTACTCTATG AGTCGCTCGA CGACGACATC GTTGACGTGT TCGACGCGGT TCGCTCACGT
GTGCTCTCGG ACGCTCCCGA AGACTTGCGG CGGAACTGCC ACCTACAGGG CAACGAGTTC
AACATCACGG TGAAGCCGAA CTTCAAGATC GGCTCCGAAC GAGCTCGAGA GATCATCGAC
GCGGGGCTGG TCCATCAGCT CGAACTGCTT GGCGAGGCTG TGGCGACGCA GTTAGGGTAT
TTGAGCGACG AGGGACGCCA GTGGACGAAA GCGTTCTACG CCGACGCGGA TCCCGAGATT
GACGGCGTCC TCACCGAGCG TAAGGAGACC TCTGAGTGTA AGGTTAGTGA CGTTCCGGAG
GATGTGAGTG CACTCTTCGA GCGCATCGAC GTCGCGTACT ACGAGGCCGA TGCCGCGGAG
ATCGGCAGCC TCGAACTGAA TAAGGTCGCC GGCGTGGAAG CCGCCTTCGA CGTGCTCGGT
ATCGACGACC CGTTCGCCGT TGCGATGGGC GACAGCAAGA GCGATCTCCG AGTCATGCGT
TGGCTCACGG AAACGGGGAC CGGGATCTCC GCCGCCCCCG GACACGCCTC GACCGACGTC
CTGGACTTCG TCCGCGAGAC CGACGAATTG GTGTTTGACG AGGGGAAGAG CTCCAAGATG
CTGCGAGCGA TCTACGCACT GAACGAACTG GCCGCGACGT ACCGATCACG ACGGGGTGCA
TAG
|
|---|
| Protein sequence | MQVYSQLYEL YDSTDTETLR ARQDLVNVFP PLDSQVSLQQ WESVRDDLDQ QKTQIRRSFP
NGDAYAEIAA HATESQAFTA LDLYNKYERP INALVLDVDE TLRSASTTDN EIPRDTLYFL
TELHERGVPI VICTGQTLEN VKGFMIQGLG SEIVHSGDLS IVYEAGTGVF TPEHGAETKR
LLYESLDDDI VDVFDAVRSR VLSDAPEDLR RNCHLQGNEF NITVKPNFKI GSERAREIID
AGLVHQLELL GEAVATQLGY LSDEGRQWTK AFYADADPEI DGVLTERKET SECKVSDVPE
DVSALFERID VAYYEADAAE IGSLELNKVA GVEAAFDVLG IDDPFAVAMG DSKSDLRVMR
WLTETGTGIS AAPGHASTDV LDFVRETDEL VFDEGKSSKM LRAIYALNEL AATYRSRRGA
|
|---|
| |