Gene Htur_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4047 
Symbol 
ID8744675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp301407 
End bp302084 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID646514613 
ProductIntegrase catalytic region 
Protein accessionYP_003405560 
Protein GI284167282 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCG CAGACCTGCT CAGCGAGTGC TACGCGGCGG AATTTGATGA ATCTTGGGAG 
CGTGAGCGGA CGGCGACGCC CGTCAGGGTG TTCGCCGTCC GCCTCCACGC GACCGGTTGT
TCGCTCCGAG AGACACAATC GATTCTTCGC TTGATAGGCG TAGACCGCTC TCATCAAGCA
CTCTGGCACT GGGTACATCG GCTAGCTGAT AGCGTACCAG ACCCGCCGAC GGCGCAGCCG
GCACGGGTCG CCATTGATGA AACCGCTGTC AAGATCAACG GCGACTGGTC TTGGGTGTAC
GCTGCAATAG ACCTAGACTC ACGACTAATT CTTGATGTCG CAGTGTTCGG ACGGCGAGGC
ACCGATCCAG CCGCTGCGTT CCTGCATCGA TTGACCGAGA AACACAATCT CTCCGACGCT
GTGTTTCTCG TCGATGGCTA CGGCTATCTG ACTGCCCTCT CTCGATTGGG GTTAAGCGGT
CAACTCGACT ACGTCGAGCG AAACCTGATC GAAAAGTGGT TTCAGACCTT CAAGATGCGA
GTTGACCGCT TCCATAATTC ATGGGTGGGC AGTCGAGCGA GCGTCAGAGA ATGGCTTGAA
CAGTTCGTAC ACTATTATAA CACACAACGA CCGCACCAGT CACTCAACGG ACAGACTCCC
ACCGAGGTGC TAAACTAG
 
Protein sequence
MTLADLLSEC YAAEFDESWE RERTATPVRV FAVRLHATGC SLRETQSILR LIGVDRSHQA 
LWHWVHRLAD SVPDPPTAQP ARVAIDETAV KINGDWSWVY AAIDLDSRLI LDVAVFGRRG
TDPAAAFLHR LTEKHNLSDA VFLVDGYGYL TALSRLGLSG QLDYVERNLI EKWFQTFKMR
VDRFHNSWVG SRASVREWLE QFVHYYNTQR PHQSLNGQTP TEVLN