Gene Htur_4044 details

Gene Information

• Locus tag: Htur_4044
• ID: 8744672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013744
• Strand: +
• Start bp: 298982
• End bp: 299626
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646514610
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003405557
• Protein GI: 284167279
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAAGG CGGTGTTCCG GATCAAAAGC GACAGTCCGT ACGCGAGTTC GACGGCACAA 
AACAATACCC GGATCGAGTT GTGGTGTAAC GATCACTGTG ACTTACTCCA TATCGCTGGC 
GACCAACAAG CAGATGTCGT GGAACATGTC CGTTCGGGAG TTGGTGTTCG TGAATGCATC 
GAAAACGGCA GCAACCAGAC CATCATTACT GAAGCGTGTC TGAAGGAATA CGGAGACGAC 
TATATCGAAG CTCATCTCGC CGCTAACGAC TGTCTCCTCT TACCGCCGCT TCGATACGAA 
CACGGCGCGA AAGTAGTCCG CGTTCTCGCG CTTGACCCCG CTAACCTCTC AATGCTGTAC 
AGCGATATCT CGGCGGAACA CGAAGTGACG GTTGAGTCCA AACAAGAGCT GGCAACTGTC 
AGGTCAGAGA CGCCTGTGCT GTCGGTCAGC ACGTTCCTCC CGAACCTCTC TGATCGCCAG 
CGGAACGTAT TTCTGACCGC ATTTGAGCAG GGTTATTACG AGATACCACG TGGAACGACG 
ACCAGCGAAA TCGCCGAGAT CGTGGGTGTC GGTCGCCGGA CGGTAGAACA CCACCTTAGA 
CGCGCCGAAG AAAAATTCGC GAACGCGTTC GCAGAGTACC TATAG 

 

Protein sequence

MYKAVFRIKS DSPYASSTAQ NNTRIELWCN DHCDLLHIAG DQQADVVEHV RSGVGVRECI 
ENGSNQTIIT EACLKEYGDD YIEAHLAAND CLLLPPLRYE HGAKVVRVLA LDPANLSMLY 
SDISAEHEVT VESKQELATV RSETPVLSVS TFLPNLSDRQ RNVFLTAFEQ GYYEIPRGTT 
TSEIAEIVGV GRRTVEHHLR RAEEKFANAF AEYL