| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4032 |
|---|
| Symbol | |
|---|
| ID | 8744660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 285004 |
|---|
| End bp | 286011 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646514600 |
|---|
| Product | sodium/calcium exchanger membrane region |
|---|
| Protein accession | YP_003405547 |
|---|
| Protein GI | 284167269 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGAC TGCTCGGCTC CCTTGTTCTC GTAGTTGTCG CAACACTCGT CATCTGGAAA
GGAAGCGGAT ACTTCGAGCA GGCGGCAGAG CGACTGAGTA AGCACTATGG GTTACCTGTC
GCCGTCCATG GTGCCATCGT CGTTGCCATC GGTTCGAGTT TCCCCGAGAT CAGTTCCATC
GTCATCAGTA CGGTCGTTCA CGGCGAGTTT TCCCTCGGTG TCGGAGCAAT CGTTGGGAGC
GCCATCTTCA ACCTCCTCGT GATTCCAGCT CTTTCAGCCC TCTCTAGCGA GGAACTGGAA
GCGACCCGCG ACCTCATTCA CAAAGACGCG CAGTTCTACG TCATCAGCGT TCTCGTCCTA
TTCATCACTT TCGCACTCGG TGCGACCTAC GTTCCAGGGG GAACGAACCG TGCTGCGATC
CTGACACCTC CGCTGGCTCT GCTCTCACTT GCCACGTACG GAATTTACGT CTTTCTCCAC
CAGCAGGATG CTAGTGAACA CGTCGCTGAC GATTCTCTCG ATGTACGTCC AGCCCGAGAA
TGGGGAGCGC TCGTAGTAGG TCTACTCGTC ATTACCGTTG GCGTTGAGGG AATCGTCCGT
GCCGCCCTCT CACTCGGAGC GATCTTCGAC ACGCCGAGTT TCCTGTGGGG GTTGACCGTT
ATCGCTGCCG GAACGAGTCT GCCCGACGCA TTCGTCAGCG TTCGCGCCGC TCAGAATGAC
GACAGCGTTA CCAGTCTTAC GAACGTCCTC GGAAGTAATA CGTTTAACCT CTTGGTCGCT
ATCCCCGTCG GTGTCCTCTT AGCGGGGTCT GCGACCATCA ACTTCCTCGC GGCGATTCCA
ACGATGGGGT TCCTCGCGTT CGCTACGCTC GTATTTATCG TGTTTACTCG GACTCACCTC
GAACTTACCA ATCGCGAAGC ATACGGTTTC CTCGGACTGT ACGGGCTGTT CCTTCTCTGG
ATGATTCTCG AATCAATGGG TGTTATTGAG ACCGTCCAGG GAATCTAA
|
|---|
| Protein sequence | MPGLLGSLVL VVVATLVIWK GSGYFEQAAE RLSKHYGLPV AVHGAIVVAI GSSFPEISSI
VISTVVHGEF SLGVGAIVGS AIFNLLVIPA LSALSSEELE ATRDLIHKDA QFYVISVLVL
FITFALGATY VPGGTNRAAI LTPPLALLSL ATYGIYVFLH QQDASEHVAD DSLDVRPARE
WGALVVGLLV ITVGVEGIVR AALSLGAIFD TPSFLWGLTV IAAGTSLPDA FVSVRAAQND
DSVTSLTNVL GSNTFNLLVA IPVGVLLAGS ATINFLAAIP TMGFLAFATL VFIVFTRTHL
ELTNREAYGF LGLYGLFLLW MILESMGVIE TVQGI
|
|---|
| |