Gene Htur_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3995 
Symbol 
ID8744623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp248735 
End bp250039 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content60% 
IMG OID646514569 
Productsodium:dicarboxylate symporter 
Protein accessionYP_003405516 
Protein GI284167238 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.845603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTCGA CAGTCGGTCC GGTATGGCAG CGGTACCGGT CGGTGCCATT GATCTATCGC 
ATCACACTCG CGTTCCTTCT CGGATCCGCA GCGGGGATCG CATTCGGTGA GCAGATGACG
GTCGTCGAAC CACTCGGAGA CCTGTTCTTG CGGCTGCTCA ACATGCTGGT GATCCCGATC
ATCGTCTTCA CGCTGCTGAC TGGAATCCGC CAGCTATCGC CAGCTCGACT CGGCAAGATC
GGGGGAGCAA CTGTCGGCCT CTACGCAGTA ACGACCACCA TCGCAGGCAT CATCGGACTT
GCCGTCGCGA ACGCCCTTCA ACCCGGCCGT GGCGTCGAGT TTACCGGCGG TGAAGCTGAG
TCCCAGGCAC CCCCCTCACT CACCGAGGTC GTGCTTGGCA TCGTCCCGAG CAATCCTGTC
ACTGCAATGG CAGAGGGGAA CCTGCTCGCG ACCGTCTTCT TCGTGATCAT TTTCGGTATC
GCGCTCACCT ACGTGCGTGC CCAACAAGAT GAACTCGCGG ATCGTGTCGA CTCAGTGTTC
GAGGCATTTG AGATCGGAGC CGAAGCGATG TTTGTCGTTG TTCGTGGCGT CCTCGAGTAC
GGCGTGGTCG GCGTATTCGC CCTCATGGCT GCCGGGATCG GCACTGAGGG AATCGGCGTG
TTCTCGTCGC TCGGTGAACT CGTGCTCGCT GTCGCAATCG CAGTTGCCAT CCACATCACG
TTCACGTATC TACTGCTTCT CATGGGCGTG GTCGCTGACG TCTCGCCGCT CGCCTTCCTC
ATGGGCGCGA AGGACGCAAT GGTGACCGCC TTCGCCACCC GCTCCTCGAG TGGCACACTT
CCAGTGACGA TGAACAACGC CGAAGAGGAC CTCCGTATCA AGGAGCGTAT CTACTCGTTC
GCGCTTCCAG TTGGTGCCAC AGCAAATATG GACGGCGCCG CCATCCGACA AGCGATTACC
GTCGTCTTCG CCGCGAACGT GGTCGGACAA CCACTCGCGT TCTCCGAGCA AGTACTCGTG
CTGGTCGTCG CCGTGCTTAT CAGCATTGGC ACCGCCGGCG TCCCCGGAGC AGGGATTGTC
ATGCTCACCG TCGTACTCAA TCAGGTCGGT CTTCCGCTTG CGGTGGTCGG ATTCGTCGCC
GGTGTCGACC CGATCCTCGG TCGTATCGCG ACGATGAACA ACGTGACCGG TGACCTCGCG
GTTTCGACTG TCGTAGGCAA ATGGAACGAC GCGATCGACT TGGACAACGG CGTCTGGACG
CAGAAATCAG CGGGCAGTGG AAATATCGTC TCTAGCGATG ACTAG
 
Protein sequence
MYSTVGPVWQ RYRSVPLIYR ITLAFLLGSA AGIAFGEQMT VVEPLGDLFL RLLNMLVIPI 
IVFTLLTGIR QLSPARLGKI GGATVGLYAV TTTIAGIIGL AVANALQPGR GVEFTGGEAE
SQAPPSLTEV VLGIVPSNPV TAMAEGNLLA TVFFVIIFGI ALTYVRAQQD ELADRVDSVF
EAFEIGAEAM FVVVRGVLEY GVVGVFALMA AGIGTEGIGV FSSLGELVLA VAIAVAIHIT
FTYLLLLMGV VADVSPLAFL MGAKDAMVTA FATRSSSGTL PVTMNNAEED LRIKERIYSF
ALPVGATANM DGAAIRQAIT VVFAANVVGQ PLAFSEQVLV LVVAVLISIG TAGVPGAGIV
MLTVVLNQVG LPLAVVGFVA GVDPILGRIA TMNNVTGDLA VSTVVGKWND AIDLDNGVWT
QKSAGSGNIV SSDD