| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3924 |
|---|
| Symbol | |
|---|
| ID | 8744552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 180990 |
|---|
| End bp | 182192 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646514505 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003405452 |
|---|
| Protein GI | 284167174 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC GACGTGTACG AGGAGACGTT CCCTGGTCCT CCGCTCTCTT TCAGACGGTG
CTGGCGTGTT CGCTCATCGG TGTGATGGGG GTGCCGCTGA TCAGCCCTAT TCTCCCGTCC
CTCCGTTCGG TATTCGGAAT TAGCGATGCG CAGATAGGAC TCGTAATCAC AGCGTATACG
CTCCCAGGCG TGTTTCTGAC GCCGTTTATC GGCCTGATAT CCGATCGTCT GGGACGCCGA
GCGGTCGTTC TTCCCCTCCT GACACTTTTC GGTCTGGCCG GAGGAGGTAT CGCCCTCGGC
CCGCCGTTTC GCGGCGTTCT GGCTCTTCGG TTCGTCCAAG GGATCGGCGG AAGCGGACTG
ATGGTACTGG CGATAACGCT CATCGGCGAT TTCTACGCGG GAGAACGACG GAATACGGTG
ATGGGAATCA ACGGAAGCGC AATCGGTATC GGTGCCGCCG CGTATCCTCT GCTCGGTGGC
GTCTTAGCTG CCGTCCGCTG GAACGTTCCG TTCGCGTTCT TCGGTCTCAG TCTCGTCGTC
GGTGCGATCG CTCTCTTCAC GCTCGAGGAA CCCGCGGTAG ACGATCCGCC TGCGATTGGA
CCGTACGTAT CACGGGTGAT TTCCGTCGTT CTCGTCCCGC GAGCGCTCGG TCTCTGGGCC
GCAGCGTTTC TGACGTTTTT CCTGTTTTAC GGGTGTATTC TAACCGTACT ATCGCTGCTT
CTGAGCGACG TTTACGGCCT TTCTTCCGGG CAGATCGGCT TGTTATTCGG CGCGGTCTCT
ATCGCTAACG CGTCCATCGC GTCCCAGTAC GGACGTGTCT CCCGTTACTT CGAGGCAGAG
GAGCTGATCG CCCTCGGTTT CGTGGGATTC GGCATCAGCC TCCTCGGCGT CTGGGCGGCT
TCCACGCCGG TACTGATCGG CGTGATGTTG CTCTGTTTCG GTCTGGGATT CGGACTCGTG
ATGCCCTCGC TCGACACGAC CGTCGTCGGC CTCGTCTCGG GTCAACTCCG CGCGAGCATG
ATGGGCGTCC TGACGAGTAT GCTCTGGCTC GGGCAGACCG TCGGTCCGAT CGCGTTCACC
GGTTTCGCGG GCGTCGCTTT CGACGAACCG GTGACCGGAT ATCGGTTTCT ACTGTTGTTC
TGGGGGGTGG CCACGCTCGT CAGCGGCGGA CTCGCGTTCC TGGCTCTCGA TCGTCGATCC
TGA
|
|---|
| Protein sequence | MPARRVRGDV PWSSALFQTV LACSLIGVMG VPLISPILPS LRSVFGISDA QIGLVITAYT
LPGVFLTPFI GLISDRLGRR AVVLPLLTLF GLAGGGIALG PPFRGVLALR FVQGIGGSGL
MVLAITLIGD FYAGERRNTV MGINGSAIGI GAAAYPLLGG VLAAVRWNVP FAFFGLSLVV
GAIALFTLEE PAVDDPPAIG PYVSRVISVV LVPRALGLWA AAFLTFFLFY GCILTVLSLL
LSDVYGLSSG QIGLLFGAVS IANASIASQY GRVSRYFEAE ELIALGFVGF GISLLGVWAA
STPVLIGVML LCFGLGFGLV MPSLDTTVVG LVSGQLRASM MGVLTSMLWL GQTVGPIAFT
GFAGVAFDEP VTGYRFLLLF WGVATLVSGG LAFLALDRRS
|
|---|
| |