Gene Htur_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3914 
Symbol 
ID8744542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand- 
Start bp168583 
End bp169260 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID646514495 
ProductIntegrase catalytic region 
Protein accessionYP_003405442 
Protein GI284167164 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.835776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCG CAGACCTGTT CAGCGAGTGC TACGCGGCGG AATTTGATGA ATCTTGGGAG 
CGCGAGCGGA CGGCGACGCC CGTCAGGGTG TTCGCCGTCC ACCTTCACGC GACCGGTTGT 
TCGCTCCGAG AGACACAATC GATTCTTCGC TTGATAGGCG TAGACCGCTC TCATCAAGCA 
ATCTGGCACT GGGTACATCG GCTGGCTAAC AGCGTGTCAG ACCCGCCGAC GGCGCAGCCG 
TCGCGGGTCG CCATTGATGA AACCGCTGTC AAGATAAACG GTGACTGGTC TTGGGTGTAT 
GCTGCAATAG ACCTAGGCTC GAGGCTCATT CTTGATGTCG CAGTGTTCGG ACGACGAGGC 
ACCGATCCAG CCGCTGCGTT CCTGCATCGA TTGACCGAGA AACACGATCT CTCCGAAACA 
GTGTTTCTCG TTGATGGCTA CGGCTATCTG ACTGCCCTCT CTCGGTTAGG GCTGAGCGGT 
CAGCTCGACT ACGTTGAGCG AAACCTGGTC GAAAAGTGGT TTCACACCTT GAAGATGAGA 
GTTGACCGCT TCCATAACTC GTGGGTGGGC AGTCGGACGA GCGTCAGTGA ATGGCTTGAA 
CATTTTGTAC ATTACTATAA CACGCAACGC CCGCATCAGT CACTTAACGG ACAAACGCCA 
GCGGAGGTGC TAAACTAG
 
Protein sequence
MTLADLFSEC YAAEFDESWE RERTATPVRV FAVHLHATGC SLRETQSILR LIGVDRSHQA 
IWHWVHRLAN SVSDPPTAQP SRVAIDETAV KINGDWSWVY AAIDLGSRLI LDVAVFGRRG 
TDPAAAFLHR LTEKHDLSET VFLVDGYGYL TALSRLGLSG QLDYVERNLV EKWFHTLKMR 
VDRFHNSWVG SRTSVSEWLE HFVHYYNTQR PHQSLNGQTP AEVLN