| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3896 |
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| Symbol | |
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| ID | 8744524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 134317 |
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| End bp | 137172 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646514480 |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003405427 |
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| Protein GI | 284167149 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0623338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTCCTC CGGAGAAAGG GGTGCTCATG CAATCGATCT CGTTATCGGG ACCGTGGGCT
CTGCGGCTCA ATCCCGACCG CGACCGACAC GTCGTTGATC CGCCTGACGA CGTTATCGAC
GGGACGATGT ACCTTCCCGG ATCCACCGAC GAATACGGCT ACGGGACAAC CGTCGACGAT
CGACCGCGGG ACCACCTCCA ACGGACGCAT CGATACGAGG GGTCGGCGTG GTACCAGCGC
ACCGTCTCCG TCCCCGATTC CTGGGCGGGC AAACGCGTGA CACTAACGCT CGAGCGAACC
AGACCGACCG AGGTCTGGGT CGACGGGGAG CGTATCGGCT CGCGAGTGTG CCTGAGCACC
CCGCACGTAT ACGATCTCAC CGAGGCGATC GGCCCCGGCG AGCACGAAAT CGCCGTTCGA
GTGGACAACG CCGACGACTC GATGGATCGT CCGGGAGTCA GGCGATCGCA CGCGAGCACT
GAACACACGC AGACCAACTG GAACGGCATC ATCGGGGACC TCCGGCTGGA GGCGACACCG
AACGTCTGGA TCGAGAGCGT CGACCCGTTC CCGGAACCGA GCGAGAACGC CGTCGACCTC
GAGATAACCC TCGGGAACGC CACGGAGACC GATTTTCAGG GAACCGTCTC TGCCGCTGCC
CGGAGTACGA CCACCGATGA GATCCACGTC GCGGACACCG TCGATCGCCC CGTCTCGGTC
AGTGCCGGCG ATGGCTCGGC GCCGGGTCGA ACGACTCTCG AGTTCACATA CGATCTCGGA
TCCGACGCGC TCACCTGGGA CGAGTTCTCG CCGGCGGTCT ACGAGTTGAC CGTCTCGCTC
GAGACGGCAG GGGACGAGAA CGCCGCCGGC CACGAGTTCG AGACCGCGTT CGGCCTCCGC
GAGTTCGAAG CCGACGGCAC GCAGTTCTCG ATCAACGGGA CGACGATCTT CCTGCGCGGC
CGGACGGACT GCTGTGTCTT CCCCGACACC GCGTACCCGC CGACGACGGT CGCCGAATGG
GTCGATCACA TGGAGACCGC CAGAGCGTAC GGCATCAACC ACTATCGGTT CCACAGCTGG
TGCCCGCCGG AGGCGGCCTT CGAGGCGGCC GACCGCGTCG GGATGTACCT GCAACCGGAG
TGTTCCCAGT GGAACAACGG CACCTCGCTC GCCGACGCCG ACGACTACGA GTACTACGAG
CGGGAGGCCG AGCGCATTCT CGACGCCTAT GGACACCACC CCTCGTTCGT CTGCTTCACC
CTCGGCAACG AAAATCGGGG CGACGAGGAG CGAATGACCG AACTCGTTCG CCACTGTCGA
GCGCTCGACG ACCGACGGCT GTACGCCTAC GGGGCGAACA ATTTTCTTAC CTCACCGCAC
CCGGGAGACG CCGACGACTT CTTTGTTACC GCCAACGTCC CCGAAGACGC CGAGGCCAGT
CACTGGGACG TCGATCGAAC GCCCATCCGC GGGACCGGAC ACGTCAACGA TTCTCCGCCG
TCGACGGCCG TCGACTACGA GGACGAACTC GAGCCCTACG ATCTCCCCGT CGTCGGTCAC
GAGATCGGCC AGTACCAGGT CCATCCCGAC TACGACGAGA CGCGCAAGTA TCGCGGCGTC
CTCCGGGCTC GCAACCTCGA ACGGTTCGAG CGCTCGCTCG CCGATCGCTA TCTCGAAGGC
TCGGACGCGG ATTTTCGGGC CGCGTCCGGC GCGCTCGCAG TCACCTGTTA CCGCGAAGAG
ATCGAGGCCG CGTTCCGAAC GGCGGGCTTC GGCGGCTTTC AATTGCTCGG CCTCGACGAC
TTTCCGGGCC AGGGGACCGC GATGGTCGGG ATCCTCGACT CCTTCATGGA GTCGAAGGGA
CTGATCGAGC CCCACGAGTG GCGTCGCTTC TGTAGCGCAC GCGTCCCGCT CCTCTCGTTC
GACCGGTACA CCTTCACGAC CGACGACGCG TTCGAGGCCG AGTCGCTGCT CGCCAATTAC
GGCCCCGGCC CGATCGCGGA CGCGACCGCG ACCTGGTCGA TCGCCGAACT CGACGGCACG
GAAACCGCTT CCGGAGCCCT CGAGCGAGAC GTCCTCGAGC AGGGGGAGCT GACGTCCCTC
GGGACGATCG ACGCCCCGCT CGAGGACGTC GACGCGCCTG CCCGGTTCGA GGTAACGCTC
GCGGTCGAGG GAGCGGACCT CGAGGACGGC TCCGCCGTCG ATCTCCGGAC GACCTACCCG
ATCTGGGTCT ATCCCGAGAC ACCCGAAATA GCCGCCAACA CAGACGATAT CGACGTTTCC
TGGCGCTTCG ACGAGCGAAC TCGCACGCGA CTGGAGGACG GCGAGACGGT CCTCTTACTG
CCGGAACCGA GCGCGCTCCG GTACGGTCTC GAGGGCTCGT TCCAGCCGGA CTTCTGGAAC
TACGAGATCT TCAAGCAAAA CGGAAAGCCG GGGACCCTCG GAATGACGAC GGACCCCGAT
CATCCGCTGT TCGACGCCTT CCCGACCGAG GACTACGCCG ACTGGCAGTG GTGGCCCCTC
CTGCGTCACT CGCGGCCGAT CGTTCTCGAC GACGCGCCCG CCGACTTCGA ACCCACTGTA
CAGATAATCG ATACGATCTA CCGGAACCAC AAACTCGGCG TCTACTTCGA AACCGCCGTC
GGCGACGGAG CGCTCGCCGT CTGCACGCTG GATCTCTCCG GGGACGCTCC CGCCGTCCGG
CAGTTTCGAC ACAGCCTCGA GTCCTACCTC GCGTCCGAGG CGTTCGATCC GGATTCCGCC
CTCTCTACCG GCGTCCTCGA CAGCCTCCTC AACGCCGGAC GGGACGACGA ACGCGACTAC
GGGGACGACG CCGGCGCGTG GGTCGAACGC AACTGA
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| Protein sequence | MCPPEKGVLM QSISLSGPWA LRLNPDRDRH VVDPPDDVID GTMYLPGSTD EYGYGTTVDD
RPRDHLQRTH RYEGSAWYQR TVSVPDSWAG KRVTLTLERT RPTEVWVDGE RIGSRVCLST
PHVYDLTEAI GPGEHEIAVR VDNADDSMDR PGVRRSHAST EHTQTNWNGI IGDLRLEATP
NVWIESVDPF PEPSENAVDL EITLGNATET DFQGTVSAAA RSTTTDEIHV ADTVDRPVSV
SAGDGSAPGR TTLEFTYDLG SDALTWDEFS PAVYELTVSL ETAGDENAAG HEFETAFGLR
EFEADGTQFS INGTTIFLRG RTDCCVFPDT AYPPTTVAEW VDHMETARAY GINHYRFHSW
CPPEAAFEAA DRVGMYLQPE CSQWNNGTSL ADADDYEYYE REAERILDAY GHHPSFVCFT
LGNENRGDEE RMTELVRHCR ALDDRRLYAY GANNFLTSPH PGDADDFFVT ANVPEDAEAS
HWDVDRTPIR GTGHVNDSPP STAVDYEDEL EPYDLPVVGH EIGQYQVHPD YDETRKYRGV
LRARNLERFE RSLADRYLEG SDADFRAASG ALAVTCYREE IEAAFRTAGF GGFQLLGLDD
FPGQGTAMVG ILDSFMESKG LIEPHEWRRF CSARVPLLSF DRYTFTTDDA FEAESLLANY
GPGPIADATA TWSIAELDGT ETASGALERD VLEQGELTSL GTIDAPLEDV DAPARFEVTL
AVEGADLEDG SAVDLRTTYP IWVYPETPEI AANTDDIDVS WRFDERTRTR LEDGETVLLL
PEPSALRYGL EGSFQPDFWN YEIFKQNGKP GTLGMTTDPD HPLFDAFPTE DYADWQWWPL
LRHSRPIVLD DAPADFEPTV QIIDTIYRNH KLGVYFETAV GDGALAVCTL DLSGDAPAVR
QFRHSLESYL ASEAFDPDSA LSTGVLDSLL NAGRDDERDY GDDAGAWVER N
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