Gene Htur_3892 details

Gene Information

• Locus tag: Htur_3892
• ID: 8744520
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013744
• Strand: +
• Start bp: 128183
• End bp: 130192
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 646514476
• Product: Beta-galactosidase
• Protein accession: YP_003405423
• Protein GI: 284167145
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1874] Beta-galactosidase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.113241
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAATCG GAGTCTGTTA CTTCCCGGAG CACTGGCCGC GCGAACAGTG GGAGACGGAT 
GTTCGGCAGA TGGCCGACGC TGGAATCGAG TACGTCCGGA TGGCGGAGTT CTCGTGGCGG 
GTCCTCGAGC CCGAACGCGG CGCGTTCGAC TTCGAGTGGC TCGACGAGAT CGTCGAGCTG 
ATTGGCGAGT ACGGGATGCA GGCCGTCCTG TGTACGCCGA CGGCGGCACC GCCGCGGTGG 
CTCGTCGAGG AACGCCCCGA GATCCGCCAG CGAGACCGTG ACGGAACCGT CAGGGACGTC 
GGAAGCCGCC GGCACTACTG TTTCAACTCC GCGGCCTATC GCGAGGAGAC CGAACGCGTC 
GTCCGAGCGA TGGCGGAGCG CTACGCCGAC GATCCGCGCG TCGTCGGCTG GCAGACCGAC 
AACGAGTACG GCTGTCACGG CACGACACGG TGTTACTGCG ACGACTGCGC TGACGCGTTC 
CGGGACTGGG TCCGCGAGGA GTACGAGACC GTCGACGAAC TCAACGAAGC GTGGGGAACG 
ACGTTCTGGA GCCAACAGTA CGACGACTTC GAACAGGTCG ACCTCCCGCG GCCGACGCCC 
GCGCAGGACC ATCCGGCGAT GCTGCTCGAT TTCGCCCGAT TCTCGAGCGA CAGCGTCGTC 
AAGTACAATC GGCTGCAGGC GGACCTGCTT CGCGAGGCGA ACGACGAGTG GTTCGTCACG 
CACAACTTCA TGAACCTGTT CGAGTCGGTG GACACCTACG ACTTCGACGA GGACCTCGAT 
CTGATTTCCT GGGACTCGTA CCCGACAGGC CACGTCCAGC AGGCCGGCGG CGAGACGACG 
ACCGACGAGC TCCGCGCGGG GAACCCCGAT CTGCTCTCGT TCAACCACGA CCTCTACCGG 
AGCGTACTCG ACCGACCGTT CTGGGTGATG GAACAGCAAC CGGGCGACGT TAACTGGCCG 
CCCCACTCGA CCCAGCCCGC GGAGGGGGCG ATGCGCCTCT GGGCCCACCA CGCGACCGCC 
CACGGCGCCG ACGCCGTCGT CTACTTCCGC TGGCGGCGCT GCCTCGAGGG CCAGGAGCAG 
TACCACGCCG GCCTCCGCAA GCAGGACGGG TCGGCGGATC GGGGCTACGA CGACGCGACG 
CGGGCCGCCG AGGAACTGTT CGACCTCGAC CACGTCGACG CGCCCGTCGC CCTGCTTCAC 
GACTACGAGA ACGCGTGGGC GCTCGGCGAA CAGCCCCACG CGCCCGACTT CGACTACTGG 
CAGCTGTTGC AGTCGTTCTA CGCGTCGCTG CGAGCGCACG GCGTGCAGGT CGATATCGTC 
CATCCCGAGA GCGACCTCGA GTCCTACGAC GCGGTCGTCG CGCCGACGCT CCACCTGGCG 
ACCGAGTCGC TGGCCGACCA CCTGACCGCG TACGTCGAAT CCGGCGGCGA ACTGCTGCTC 
GGCCCGCGGA CGGGGGTCAA AGACGCGCAC AATAAGCTCC GTCCCGATCT CCAGCCCGGT 
CCGCTGTCGG AGCTCGTCGG CGCGAGCGTC GACCAACACG AGTCGCTCCC GACGCAGTTC 
GAGCCGACCG TCGCCGGAAC CGACGGGACG AACGCCGAGT ACGCGTTCCG AACGTGGGCC 
GAGTGGCTCG AGGCCGACGC GGCCGAGCCG CTACTCGAGT ACGCGGGCGA CGATATCGAA 
GGCGGACGGA CGGCGGCCGT CCGAAACGCG GTCGGTGAGG GAAGCGTCGT CTACTGCGGT 
GTCTGGCCCG AGACCGACCT CGCGAACGAC CTCGTCGGGT CGCTCCTCGA CCGCGCCGGC 
GTCCGCCGGA TGGACGTGCT CCCCGACGGC GTTCGCGTCG CCCGACGCGA CGGCCACACC 
TGGGTGCTGA ACTTCGGGAG CGACCCGATC GCGGTGACCC TCGAGGGGGA CGCGTCGTGG 
CGACTCGGCG GTCCGGAAAT CGGTCCGTTC GATCTCGCGA TCGCCGAGAC CAACGCGGTC 
GACGACCTCT CGGTACGGAT CCGAGACTAG 

 

Protein sequence

MSIGVCYFPE HWPREQWETD VRQMADAGIE YVRMAEFSWR VLEPERGAFD FEWLDEIVEL 
IGEYGMQAVL CTPTAAPPRW LVEERPEIRQ RDRDGTVRDV GSRRHYCFNS AAYREETERV 
VRAMAERYAD DPRVVGWQTD NEYGCHGTTR CYCDDCADAF RDWVREEYET VDELNEAWGT 
TFWSQQYDDF EQVDLPRPTP AQDHPAMLLD FARFSSDSVV KYNRLQADLL REANDEWFVT 
HNFMNLFESV DTYDFDEDLD LISWDSYPTG HVQQAGGETT TDELRAGNPD LLSFNHDLYR 
SVLDRPFWVM EQQPGDVNWP PHSTQPAEGA MRLWAHHATA HGADAVVYFR WRRCLEGQEQ 
YHAGLRKQDG SADRGYDDAT RAAEELFDLD HVDAPVALLH DYENAWALGE QPHAPDFDYW 
QLLQSFYASL RAHGVQVDIV HPESDLESYD AVVAPTLHLA TESLADHLTA YVESGGELLL 
GPRTGVKDAH NKLRPDLQPG PLSELVGASV DQHESLPTQF EPTVAGTDGT NAEYAFRTWA 
EWLEADAAEP LLEYAGDDIE GGRTAAVRNA VGEGSVVYCG VWPETDLAND LVGSLLDRAG 
VRRMDVLPDG VRVARRDGHT WVLNFGSDPI AVTLEGDASW RLGGPEIGPF DLAIAETNAV 
DDLSVRIRD