| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3888 |
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| Symbol | |
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| ID | 8744516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 121275 |
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| End bp | 123044 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646514472 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003405419 |
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| Protein GI | 284167141 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.170596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACACA ATCACACCCG CGTAAATAGA CGGCAGTTTA TCGGCGCGAG CGCCGGCACG
GTCGCCGCCA CGTTCGCGGG CTGTCTCGGC AGCGACAGCG ACTCGACGGA GTTCGTCACG
GCGTTTGCGG GCGGCCGTCA GCCGACACAG GTTCACTTCA ACCCGTGGAA CGCGTCGGAC
TACGCACAGA CATACAGCAT CTACTGGCTT CAGGGAACGG TCGTGACACA CGCCGACGGG
ACCGTCTCGA CCGATTTCTT CGAGGACCTC AGCGTCGACG GTCGGGAGGT CACGCTCGAG
TTCTCGGACG AGTGGAGCTA CTGGAACGGC AACGACATCA CCGCCGAGGA CTACCTCATC
GAACAGGAGA TCTGGCGCTA CCAGGATCCG GAGGCCTCGC CGATCGAAGG CCACGAACTG
GTCGACGAGT ACACCGTCAA GCGGATCTAC AAGGACGATA TCTCGCCGAC GATCGCGAAA
TCGAACGCGG GCGCCGGCAC CTCCGCGCCG AAGTCGGTCT TCCGCGAGTA CTACGAGCGT
TACGAGGACG CCACCACGGA GAGCGAGCGG GAGGCCGTGA CCGACGACCT CCTCCAGCTG
ACGATCGACA CCGAGGAGTT CGTCGAGGAG GGGTACGGGA GCTCGCTGTT CAAGATCGAG
GACTTCAACT CCTCCGAGAC GCTGGCGACG AAGTGGGACG ATCACCCGTG GGCGGACCGA
ACGGACATCG AACAGATCCG CGTAAAGCCA ACCGAGGGGA CGCAGGTCGA GCAACTCGAG
AAGAGCGACG AGCTCGACAT GACCCAGTAC ATCACCGAGG ACCAGCGGTC GGACTACCCC
GACAACATCG AGAACATCTA CGAACTTGAC CACTACAGCT GCCGGAAGTA CATCCTGAAC
TGGAACAACG AGCACCTCGC GCGGCGGCCG GTCCGGCGGG CGATCATCTC CGCGATCGAC
ATCCCCTCGA TCGTCGACGC CGCGAACCAG ACCGGGTTGA TGGCGACGCC AACGCAGGTC
CAGACGGGGA TTCGTGCATC CATCGAAGAG AAGTACCTCG GCGAGGACTT CGTCGACAGT
CTCATCGACT ACCCCGTCGA GGCCGACGAA GAGACGGCCG TCGAGTACAT GGAGGAGGCC
GGCTACTCAC GTGAGGGCGG CGAGTGGATC GGTCCCGACG GCAACGCGAC TGACTTCACC
GCTATCACGC AGGCGGGGGT CAGGAAGTCC CAGCCGATGA AGGTCTTCAC CGACCACCTC
AACGAGTTCG GCTTCAACGT GGAGATGGAG GCCGTCGGCC AGGACTACTA CTCGCGGGTT
CAGGAGTGGG AGTTCGATAT CGCCTGGATG TGGCACGTCG CACTGCCGTA CTGGCATCCC
GTGGCGTACT TCTCGAACGA CTTCTACGGT CTCCTCGCCG GCGACGTCAC CAGCGACAGC
GACACGGGTC CGACCGGCGT GCCGTTCTCG CTCGAGATCC CAGAGGAAGT CGGCGCGACG
GAAGTCGGGG GCAACGGCGT CGAGATCAAC CCGGCCCAGC TCATGGTCGA CCTCGAGGGC
GCATCGTCCG AGGAGGAAAC GATCGAGCTC ACGCGAACGC TCGCTCAGTG GGTCAACTAC
GATCTGCCCG TGATCGTCCA CTTACAGGAG AACCGCGGCT TCGCCGGCGA CGTCGAGAAC
TTCGACTTCC CGAGCGAGGA CGACTTTCGC ATGGATCGCT CCAATCCGGG ACCGAACGCG
CTGCTGAACG GCCACATTAC GACTAACTAA
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| Protein sequence | MRHNHTRVNR RQFIGASAGT VAATFAGCLG SDSDSTEFVT AFAGGRQPTQ VHFNPWNASD
YAQTYSIYWL QGTVVTHADG TVSTDFFEDL SVDGREVTLE FSDEWSYWNG NDITAEDYLI
EQEIWRYQDP EASPIEGHEL VDEYTVKRIY KDDISPTIAK SNAGAGTSAP KSVFREYYER
YEDATTESER EAVTDDLLQL TIDTEEFVEE GYGSSLFKIE DFNSSETLAT KWDDHPWADR
TDIEQIRVKP TEGTQVEQLE KSDELDMTQY ITEDQRSDYP DNIENIYELD HYSCRKYILN
WNNEHLARRP VRRAIISAID IPSIVDAANQ TGLMATPTQV QTGIRASIEE KYLGEDFVDS
LIDYPVEADE ETAVEYMEEA GYSREGGEWI GPDGNATDFT AITQAGVRKS QPMKVFTDHL
NEFGFNVEME AVGQDYYSRV QEWEFDIAWM WHVALPYWHP VAYFSNDFYG LLAGDVTSDS
DTGPTGVPFS LEIPEEVGAT EVGGNGVEIN PAQLMVDLEG ASSEEETIEL TRTLAQWVNY
DLPVIVHLQE NRGFAGDVEN FDFPSEDDFR MDRSNPGPNA LLNGHITTN
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