| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3887 |
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| Symbol | |
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| ID | 8744515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 119260 |
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| End bp | 121065 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646514471 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003405418 |
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| Protein GI | 284167140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.544175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCGTA ACGGATACCC CGTGGGAAAG ATGATCAAGG ACCACAGTCA TTTGAGTAGA
CGTAAATTTG TCGGGGCCAG CGCCGGAACG CTCGCTGCGA CGCTCGCTGG GTGTGTCGGT
GGCGGCGACA ACAGTACGGA GTTCGTCACG GCGTTCGAAG GGGGTCGTCC GCCGACGGAG
GTCCACTTCA ATCCGTGGAA CGCCTCGGAC CACGCACAGA CGTACAGTAT CTACTGGACA
CAGGAAACGC TCGCGACGCA TTCTGACGGG ACCGTCTCGA CCGATTTCTT CGAGGACATC
AGTGTCGACG GCCGCGAGGT CACGATCAAG TTCTCAGACA AATGGAACTT CTGGAACGGC
AACGACATCA CCGCCGAAGA CTACTTCATC GAGGCGGAGC TCTGGCGCTA CCAGGACCCG
GAGGCTTCCC CCCTCGAAGG CCACGAACTG GTCGACGACT ACACCGTCAA ACGAATCTAC
AAGAACGAGG TCTCGCCGGT TATCGCGAAA TCGAACGCGG GTCTCGGGAC GAGCGCCCCG
AAATCGGTCT TCCGAGAGTA CTACGAGCGC TACGAGGACG CGGGCGGAGA AAGCGGCCGC
CAGGCGGTTA CCGAGGATCT CCTTCAGATG ACGATCGATA CCGAGGAGTT CGTCGAGGAG
GGATACGGAA GCTCGCTGTT CAAGATCGAG GACTTCAACT CCTCCGAGAC GCTGGCGACC
AAGTGGGAGG ACCATCCGTG GGCCGACGAA ACGGATATCG AGCAAATTCG GGTCCTTCCG
AACGTCGAAT CGGGGACGCA GGTCGAGCAG CTCGAGAAGA GTGACAAGCT CGACATGACT
CAGTACATCA CCGAGAGCCA GCGCCCGGAC TACCCCGACA ACATCGAGAA TATCTACGAG
TTGAGCCACT ACAACTGCCA GAAGTTCATG CTGAACTGGA ACAACGAGCA CCTCGCGCGG
CGGCCGGTTC GCCGCGCGAT CATCTCCGCG ATCGACATTC CCGCGATCAT CGACGCCGCG
ACGCAGACGG GAATGCTCGC GAGCCCGACG CAGGTCCAGA CGGGAATCCG AGAGACCATC
GAAGAGGAAT ACCTCGGTGA GGACTTCGTC GACCAGCTCA TCGACTACCC CGTCGAGGCC
GACGAGGAGA CGGCGATCGC CTACATGGAG GAGGCCGGCT ACTCGCGGGA GGGCGACGAG
TGGATCAGTC CCGACGGCAA CGCGACTGAC TTCACCATCA TCACGCAGTC CGCCGTTTCG
CAGTCCCAGC CGACGAAAGT CTTCACCGAC CACCTCAACG AGTTCGGGCT GAACGCGGAG
ATGGAGGCCA TCGGTCAGGA CTACTACTCG CGGGTCCAGG AGTGGGAGTT CGACATCGCC
TGGATGTGGC ACGTCGCACT GCCGTACTGG CATCCCATGG CGTACTTCTC GAACAACTTC
TACGGCCTCC TCGCCGGCGA CGTCAACAGT GATAGCGACA CGGGACCGAC CGGCGTGCCG
TTCTCGCTCG AGATCCCCGA GGAGGTCGGC GCGACGGAAG TCGAGGGTAA CGGCGTCGAG
ATCAACCCGG CCCAGCTCAT GGTCGACCTC GAGGGCGCAT CGTCCGAGGA GGAGACGAAG
GAACTGACCC GAACGCTCGT CCAGTGGGTC AACTTCGACC TACCCGCGAT CATCCACTTA
CAGGAGAGCC GCGGCTTCGC CGGCGACGTC GAGAATTTCG ACTTCCCGAG CGAGGACGAG
TTCCGAATGG ACCGTCCGAA CCCGGGACCG TTCGCGCTGC TGCGAGGACG TATTTCGACG
AATTAG
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| Protein sequence | MGRNGYPVGK MIKDHSHLSR RKFVGASAGT LAATLAGCVG GGDNSTEFVT AFEGGRPPTE
VHFNPWNASD HAQTYSIYWT QETLATHSDG TVSTDFFEDI SVDGREVTIK FSDKWNFWNG
NDITAEDYFI EAELWRYQDP EASPLEGHEL VDDYTVKRIY KNEVSPVIAK SNAGLGTSAP
KSVFREYYER YEDAGGESGR QAVTEDLLQM TIDTEEFVEE GYGSSLFKIE DFNSSETLAT
KWEDHPWADE TDIEQIRVLP NVESGTQVEQ LEKSDKLDMT QYITESQRPD YPDNIENIYE
LSHYNCQKFM LNWNNEHLAR RPVRRAIISA IDIPAIIDAA TQTGMLASPT QVQTGIRETI
EEEYLGEDFV DQLIDYPVEA DEETAIAYME EAGYSREGDE WISPDGNATD FTIITQSAVS
QSQPTKVFTD HLNEFGLNAE MEAIGQDYYS RVQEWEFDIA WMWHVALPYW HPMAYFSNNF
YGLLAGDVNS DSDTGPTGVP FSLEIPEEVG ATEVEGNGVE INPAQLMVDL EGASSEEETK
ELTRTLVQWV NFDLPAIIHL QESRGFAGDV ENFDFPSEDE FRMDRPNPGP FALLRGRIST
N
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