Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3881 |
Symbol | |
ID | 8744509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | + |
Start bp | 113871 |
End bp | 114635 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646514465 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003405412 |
Protein GI | 284167134 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0445714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGCA AACCACGCCG ACCGGTCCAG GCCGCCGCGA CGACGTTTCG GGTCATCGAG ACCCTCCACG AACTCAACGG CGCCGGCGTC TCCGAACTCG CGGACGAACT CGAGATGCCC AAGAGCACGG TCCACGACCA CCTCCAGACG CTGAGCGAAG CCGAATACCT CGTCAAGCGT GACGGGAAGT ACCACGTCGG CGCGCGTTTC CTCGAGCTCG GTGGGTTCGC TCGCAGTCAG ATGAAACTGT ACCAGATCGC CTCCCCCGAA ATCGAGAAGT TAGCGGAGGA GACCGGAGAG CACGCGAACC TCATGATCGA AGAGCACGGG AAGGGGATCT TCCTCAACAA GGCGAAAGGC CGGGACGCCG TGAACCTCGA TACGCACATC GGCAAGCGGG TTCACCTCCA CACCACCGCC ATGGGGAAGG CGATCCTCTC GAAGCGCTCC GAAGCGGCCG TCGACGAGAT CATCGACCGC CACGGCCTCC CTCGCGTGAC CGAGAAGACG ATCACGGACG CCGACGAACT GAAGGATGAA CTGGCGGAAA TCCGCGATCG GGGGTACGCG ATCGACGACG AGGAGCGGGT CGCCGGAATG CGGTGTGTCG CGGCGCCGAT CTGTGACGGC GACGAGACTC CCCTCGGCGC GATCAGCGTC TCGGGGCCGA CGAACCGATT CAACGACGAG ACGTTCACGA ACGAGATTCC GAAGACCGTG CTGAGCACTG CGAACGTCAT CGAAGTGAAC ATGACCTACT CCTGA
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Protein sequence | MSSKPRRPVQ AAATTFRVIE TLHELNGAGV SELADELEMP KSTVHDHLQT LSEAEYLVKR DGKYHVGARF LELGGFARSQ MKLYQIASPE IEKLAEETGE HANLMIEEHG KGIFLNKAKG RDAVNLDTHI GKRVHLHTTA MGKAILSKRS EAAVDEIIDR HGLPRVTEKT ITDADELKDE LAEIRDRGYA IDDEERVAGM RCVAAPICDG DETPLGAISV SGPTNRFNDE TFTNEIPKTV LSTANVIEVN MTYS
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