Gene Htur_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3860 
Symbol 
ID8744488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp88594 
End bp89910 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content67% 
IMG OID646514445 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003405392 
Protein GI284167114 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00230775 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCG ATATCGCGTT CGACGTCGTC GTCGTCGGCT CCGGGCGCGC CGGGACGGCC 
GCGGCGTACA AGCTCGCCAA GGAAGGCGTC GACGTCGCGC TCGTCGAGCG AGCGAAGCAA
CCGGGAATGA AGAACGTGAC CGGCGGCGTC CTCTACGGGG AGATCATGGA CGACCTCGTC
CCAGAGTATC CCGAGGAGGC ACCGCTCGAG CGCCATGTCG TCGAGCACAA CATCAAGCTG
CTCCACGGGG ACGCCGAGGT CGGGATCAGC TATCGGGATC AGGAGCTCCG CGAGGAGCCG
AACTACACCC TTATGCTCGG CAAGTTCGAT CGCTGGTTCG TCGAGAAAGC CGAGGAGCGA
GGGGCCGTCT TCGTCCCCGA GACGACGGTC ATCGACGTCA CGCAGACGGA CGACGGGGCC
GTCGTCCACA CGGACCGCGA GGGCGGCGAC ATCGCGTGTC AGGCGGTGAT TGGCGCCGAC
GGCGTCAACA CCACCGTCGG TCGGAAGACG GGCATCCAGC GCACGATGCA CAACCGGGAC
ATGGCCCTGT CGGTTAAGAA GGTGATCCAG CTCGACCGCG AGACGATCAA CGAGCGGTTC
AGCTTGGACG GCGACGAGGG CGCCGCCTAC GTTTACACCG GCTTCCCGGA AGGCGCGCCG
ACCATCGGCT ACTTCATCTA CACGTTCGAG GACCGGATCT CCGTCGGCGC GGTCGGCAGC
CTCGAGGTGC TGCGGCACCT CGGCGATGAA GGGTACGGCA AGACCGGGAC GCCGTTGTAC
TCACTGCTCG AGCAGTTCAT GGAACTGGAC GCAGTCCGTC CCTACGTGGC GGGCGACGTC
CTCGACGAGT ACCAGGGCAT TCTCGTCCCC GAATTCTCGT ACGATACGCT CCCTGACCGA
TACGATCGGC GGGTCGCCCT CGTCGGGGAC GCCGCCGGCC TCGTCCTCAA CAAAGGGTAC
ACCTTCCGCG GGCTCGACTA CGGCATTACC AGCGGGCTCG CGGCGGCGGC GTCGGCGCTG
GAGTGTCGCG GCGACGGCGA CTGGACCGCC TTCGGCGAGC GCTACGATCG CCGCCTCGAG
AACTCCTACG TCCTCAGGGA CATGAAACAG CACCGCCACC TCCCGGAGTT CCTCGAGAAC
GAGCGCATGT ACGGCGCGTA CCCCGGCATG GCCGCCGAAA CGCTCCGGGG GATGTACTCC
TCGAGCACCG ACGCCGAGGG ACTGACGTGG CGACAGGCCT GGAACGCGTT CCGCCGGAGC
GACGCCACCG TTCGCGGGCT CCTATACGAC GGCTACCGGG CGTTCCGGTC GCTGTGA
 
Protein sequence
MSADIAFDVV VVGSGRAGTA AAYKLAKEGV DVALVERAKQ PGMKNVTGGV LYGEIMDDLV 
PEYPEEAPLE RHVVEHNIKL LHGDAEVGIS YRDQELREEP NYTLMLGKFD RWFVEKAEER
GAVFVPETTV IDVTQTDDGA VVHTDREGGD IACQAVIGAD GVNTTVGRKT GIQRTMHNRD
MALSVKKVIQ LDRETINERF SLDGDEGAAY VYTGFPEGAP TIGYFIYTFE DRISVGAVGS
LEVLRHLGDE GYGKTGTPLY SLLEQFMELD AVRPYVAGDV LDEYQGILVP EFSYDTLPDR
YDRRVALVGD AAGLVLNKGY TFRGLDYGIT SGLAAAASAL ECRGDGDWTA FGERYDRRLE
NSYVLRDMKQ HRHLPEFLEN ERMYGAYPGM AAETLRGMYS SSTDAEGLTW RQAWNAFRRS
DATVRGLLYD GYRAFRSL