Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_3853 |
Symbol | |
ID | 8744481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013744 |
Strand | - |
Start bp | 79452 |
End bp | 80276 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646514438 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003405385 |
Protein GI | 284167107 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.102966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAAT ACGACTTCAG CGACACGGTG GCGTTCGTCA CCGGCGCCGC GCACGGACAG GGACGATCGC ACGCACAGTA TTACGCGAAA CACGGCGCCG ACGTCGTCGT CACCGATATC GCCGGCGGAA TGGATTCGGT CCCCTACGAC CTCGGCACGG AGGACGAACT CGACGAGACG GCCGGTCTCG TCGAAGATGA GGGCCAAGAG GCGCTGGCAC TTGGGGTAGA CGTCCGCGAC GAGGACGACG TCCAGTCGGC CGTGGAGGAG GCGGTCGATC ACTTCGGTCA CATCGACGTT CTCGCGAACA ACGCGGGGAT CGTGACGATA TCGGACATGG TCGAGATGGA CGAGCTGCTG TGGGACGAGA TGATCGACAC CAACCTCAAG GGCGTCTGGC TCTGCGCGAA ACACGTCGGC AAACACTTCG TCGATCGCGG CGACGGCGGG AAGATCGTCT CGACGTCCTC GACGGCCGGT CTCGTCGGCA ATCCCGGCGC CGGACACTAT TCCGCGGCCA AACACGGCGT GATCGGACTG ACGAAGACGC TGGTGCTCGA ACTTGCGGAG TACGACGTCA ACGTCAACGC CGTCTGTCCG ACCGTCGTCG GCACGCCGAT GATCACCGGC ATGACCGAGG CCTACGGCGA GGAAGTGCTC GAGGAAATTG GAGAGCTGGC CGGCCAGTTC AACGTGTTCG AGGACGAGGA TCCGGCGATC GAATCGCGGG ACATCTCGGA AGCGTACATG TGGCTCTCGA GCGACGCCGC TCGCTACGTG ACGGGCATCG CGCTCCCCGT CGACGCGGGA ATGACGTCGA AATAG
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Protein sequence | MPEYDFSDTV AFVTGAAHGQ GRSHAQYYAK HGADVVVTDI AGGMDSVPYD LGTEDELDET AGLVEDEGQE ALALGVDVRD EDDVQSAVEE AVDHFGHIDV LANNAGIVTI SDMVEMDELL WDEMIDTNLK GVWLCAKHVG KHFVDRGDGG KIVSTSSTAG LVGNPGAGHY SAAKHGVIGL TKTLVLELAE YDVNVNAVCP TVVGTPMITG MTEAYGEEVL EEIGELAGQF NVFEDEDPAI ESRDISEAYM WLSSDAARYV TGIALPVDAG MTSK
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