Gene Htur_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3824 
Symbol 
ID8744452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp48388 
End bp50574 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content63% 
IMG OID646514410 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003405357 
Protein GI284167079 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.676113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCTG TAGCCCAATC TACCGTGGCG AGGGAGACGT ACTGGGGAAT CACGAGCGTC 
GAGTACGCCG TGTTCTACTT CCTCGCGTTC ACGGCGGTCG CCGTCTTCGC GTACGGTGTC
TACCGGCGGT TCGCGCGCTA CTCCCGCGGG GACGATGAGT CGTCCCCGCG GGTCGACGAT
CTGTCGAAGC GCATCGTCAG CGCGTCCAAG ATCGCCCTCT CGAACGAGAA GCAGTTCAAC
CGGGACCTCT ACGGCGGTCT GATGCACGCG TTTATCCTCT GGGGATTCCT GACGCTGTTC
ATCGCGACGA CGATCCTGAT GATCGACGAG TACGCCGCTC AGGCGGTGTT GCACACGACG
TTCTGGGAGG GCGACTTCTA CCTCGCCTAC CAGTTCGCGG TCGACGCAAT GGGGCTACTC
TTCGTCGTCG GCCTCGGAAT GGCGATCTAC CGGCGCTACT GGGTCCGGAA TCACCGCCTC
TGGGGTCGTC ACACCTCAAG CGAGGACGAC CTCTTCGTCT GGACGCTGTT CGGCCTCGGC
GTCGGCGGCT TCCTCCTCGA GGGGTTGCGC GTCTACAGCG CCGGGATCCC GGACCACGAG
GTCGTCAGCT TTGTCGCCTA CGGGATGGCG CTCGGCTTCG AAGCCGTCGG ACTCCCGACG
CTCGGGCCCG AGCAGGCCGG CCTCAACGCG TCTGGGCTGA ACGTCGAGAA CCTCCACTGG
CTCGCGTGGT GGTCGCACTC GCTGCTCGCG TTCTTCTTCA TCGCGTGGAT CCCTTACGCG
AAGCCGTTTC ACATGCTCTC GTCGTTCGCG AACGTCGTCA CGCGCGACGA GAAGGCCGGT
CGGCGGCTTC CGAACGTCCC CTCGGATCTG GACGCGACCA ACGCCGAGTC CATCGACGAC
TTCACCTGGA AGGAACTGCT CGATCAGGAC GCCTGCACCA AGTGCGGTCG CTGCTCGTCG
GTCTGCCCCG CGAAGGCCTC CGACCGTCCG CTCGATCCGC GAGACGTCAT CCTCGATCTG
AAGTCCTATC GGGAGGGCCT CGAGTCCGGT AGTGAAGAAC AACCGATTAT CGCCGATGGC
GGCACCTCGG TGATCGATGC CGAGACGATG GAGTCTTGCA TGGCCTGTAT GGCCTGTATG
GACGCCTGTC CCGTCGAGAT CGAACATCTC AAGAGCTTCA CCCGACTCAA CCGCCAGCTG
ACCGATCAGG GTGACATCGA CTCGAGCATG CAGGACGTCT TCCAGAACGT CATGCAGAAC
GGTAACACGT TCGGCGACTC GCCGCGCAAT CGGGGCGACT GGAGCGAGGA TCTCGCGTTC
GACGTGCCCG ACGCTCGCGA GGAGGAAGTC GACTACCTCT GGTACGTCGG GGACTTCCCG
AGCTACGACG AGCGCAACAA GCAGGTCGCG CGCTCGCTAG CGACGATCCT CGAAGAGGCG
GACGTCAGCT TCGGCATCCT CTTCGACGAC GAGAAGTACG ACGGCAACGA CATCCGCCGG
GTCGGCGAGG AGTTCCTCTA CATCGAACTC GCCGGCCACC ACGTCGAGAC CTGGGAGGAT
TGTGAGTTCG ACACGATCGT CTGTACAGAT CCGCACTCCT ACAACACGTT CAAGAACGAG
TATCCGGAGG TCGACTTCGA CGAGTTCGCC GACGACCCGA TGATGCCCTT CGAGTACGAC
GAACGGTGGA ACGAAGACAG CGAAATCGAG GTCTACCACT GGACCCAAGC CGTCGAAGAA
CTGGTCAACG AGGGCAAACT CGAGCTGAAC GGCTCCGAAC TCGACTACAC GGTCACCTAC
CACGACCCGT GTCATCTCGG CCGGTACAAC GACGAGTACG AAGCCCCGCG CGCACTCATC
GAGGCGACGG GCTGCGAACT CGACGAGATG CCCCGCAACC GCAGCAATTC CTTCTGCTGT
GGCGGGGGTG GCGGCGGCCT CTGGATGGAT TTCGAGGAAG AGCCCAAACC CAGCGAGGAA
CGCATCCGCG AAGCCCTCGA GGACACGGAC GCCGGGAGCG GGGTCGAGAA GTTCGTCGTC
GCCTGTCCGA TGTGCATGAC GATGTACGAG GACGGGCGCA AGACCGGTGG CTACGAGGAC
GAGATCGAGA TCGTCGACGT CGCCGAACTC ATCGTCGAAG CGATCGGGAA AGAAGACGAA
GCGAGGGTCG AAGCCGCCGC TGACTAG
 
Protein sequence
MDAVAQSTVA RETYWGITSV EYAVFYFLAF TAVAVFAYGV YRRFARYSRG DDESSPRVDD 
LSKRIVSASK IALSNEKQFN RDLYGGLMHA FILWGFLTLF IATTILMIDE YAAQAVLHTT
FWEGDFYLAY QFAVDAMGLL FVVGLGMAIY RRYWVRNHRL WGRHTSSEDD LFVWTLFGLG
VGGFLLEGLR VYSAGIPDHE VVSFVAYGMA LGFEAVGLPT LGPEQAGLNA SGLNVENLHW
LAWWSHSLLA FFFIAWIPYA KPFHMLSSFA NVVTRDEKAG RRLPNVPSDL DATNAESIDD
FTWKELLDQD ACTKCGRCSS VCPAKASDRP LDPRDVILDL KSYREGLESG SEEQPIIADG
GTSVIDAETM ESCMACMACM DACPVEIEHL KSFTRLNRQL TDQGDIDSSM QDVFQNVMQN
GNTFGDSPRN RGDWSEDLAF DVPDAREEEV DYLWYVGDFP SYDERNKQVA RSLATILEEA
DVSFGILFDD EKYDGNDIRR VGEEFLYIEL AGHHVETWED CEFDTIVCTD PHSYNTFKNE
YPEVDFDEFA DDPMMPFEYD ERWNEDSEIE VYHWTQAVEE LVNEGKLELN GSELDYTVTY
HDPCHLGRYN DEYEAPRALI EATGCELDEM PRNRSNSFCC GGGGGGLWMD FEEEPKPSEE
RIREALEDTD AGSGVEKFVV ACPMCMTMYE DGRKTGGYED EIEIVDVAEL IVEAIGKEDE
ARVEAAAD