Gene Htur_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3730 
Symbol 
ID8744356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp3845082 
End bp3845696 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID646514317 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003405265 
Protein GI284166986 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCGC CGGCCCCCGA GGCGACGCTC GAGGCGGTCA GGCGCGAGGA GGTGCTCTCC 
TGGGAGATCG ACCGCGAGGC CCAGCGGATT CGCTTCCTGT CGCTGATCGT CGGCGACCCA 
GACGTGCTCG GCGATCTGGC CGACGACCTC GAGCACATGT ACCGATACGA CCTCACGCCG 
GTCGACACCG ATACGTTCTA CGGCTACGTG GAGATGGACC TCCGGAGCTC CGACGTGACG 
CTCCTCGAGG CGTTCGATCT TCCCGGCCTC GTGATCGTCC CACCGATGGT GTACACGGGC 
CGGGAGAACG TCCACATCAC CGTTCTCGGC GATCCCGAAG CGATGCCGAC GCTGCTCGAG 
CGCATTCCCG ACGGCGTCGG CGTCGAGGTC CGGCGCGTGA GCGAACACCA GCGTCGCGCG 
GAGACGCTCG CGGGGCGGCT CACCGCCCGC CAGTTCGAGG CGCTCGAGAC CGCTCGGGAA 
CTGGGCTACT TCGACGTCCC GCGAACGGGG TCGCTGGCCG AGGTCGCCGC TAAACTGGAC 
TGTTCAGAGA GCGCGGCGTC GACGCTTCTC CGGACGGCGG AGGCCGCGCT GGTCGAGGCC 
GCCGTGGCTC GGTAA
 
Protein sequence
MQSPAPEATL EAVRREEVLS WEIDREAQRI RFLSLIVGDP DVLGDLADDL EHMYRYDLTP 
VDTDTFYGYV EMDLRSSDVT LLEAFDLPGL VIVPPMVYTG RENVHITVLG DPEAMPTLLE 
RIPDGVGVEV RRVSEHQRRA ETLAGRLTAR QFEALETARE LGYFDVPRTG SLAEVAAKLD 
CSESAASTLL RTAEAALVEA AVAR