Gene Htur_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3562 
Symbol 
ID8744182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp3663677 
End bp3664843 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID646514143 
Productpolysaccharide deacetylase 
Protein accessionYP_003405097 
Protein GI284166818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGT TCGGGCGACG CGACGTCTGC CGGCTCGGCG CGACGGGCGC GTTGACGGTG 
GCCGGCCTCG GGACTGCCGG AACCGGAGCG GTCGTCGGTT CCGCCGAATC GAACACGAAC
GGTCGCGTCG TGTTCGTTTA CGACGATAGC TGGCGCGAGG ACTGGACCGA CACGTTCCCC
GTCCATCAGG ACGAGGGAGT CCCCGCCTGT TGTGCGGCTG TCGTCGACCA CGTCGACACC
TCCTGGGGGC TGCTCCCGGA ACACCTGCGG GAGATGGAGG ACGCGGGCTG GGAGATCATG
GCCCACACCG CGAGTCACGT CGCGGTCGGC AACCTCTATC TGACCGCGCC GGCCGCGGCC
GGCGACGAAC GGCTCTCTCT CGACGGGAGC TTCCTCGCCG AACACGAGGG CGAGGAGATC
GTGATCAGCG ACGGCGACCG AACCGTCGAG AACGCCGTCG CCGGCGGCGG CCGAAACGAC
GACGACGGGA TCTACCTCGA CCTCGCGGAG CCGATCGGCG AGTCGTTCGA CGCGGAGACC
GCGTACGTCC GCTTCACCGA GGACCGGATC CGAGACGAGG TCGTCGGCTC GAAGGACGCG
CTCGAAGATA TGGGCGTCGA GGTCGACGGG TTCGTCTCGC CGTTCGGTCG CAGCGACGGG
CTGGTCGAAG ACCTCGTTCG GGACCACTAC GCCGCGTTCG CGAACCGCGG TGGCAACGGA
CTGAACGCGC TCGAGGGACT CGATCCGCAC GCGCTCGGTC GCTCGAGCAT CGACGGACAC
GCGGTGACCG AAGCCGAGAT CGAGTCCTTC TTCGACAACG TCGCCGCGAA CGATACCCTC
GGCATCGCGG TCGGTCACAG CCAGTTCGAC GAGACGTCCC CCGAACGGAT CCGGTTCGCG
ATTCGGGCGG CGAAAGAGCG CGATCTCGAG ATCGTGACGC TTCGAGCGGC GCTGGCCGAT
CTCGAGGACC GGGAGGAGGA CGGCGACGGG ACCGCCGCGG ATCCGAGTGA GAGCGATGAG
ACCGACGGGG CCGGTGGAGA ATCCAACGAG AGCGACGAGA GCAACGACGA TTCGCTGCCG
GGATTCGGGA TCGCCAGCAC GCTCGCCGGC CTCGGGACCG CAGGGTATCT CCTCTCGAAT
CGCCGACGCG ACGACGAGCG ATCCTGA
 
Protein sequence
MSGFGRRDVC RLGATGALTV AGLGTAGTGA VVGSAESNTN GRVVFVYDDS WREDWTDTFP 
VHQDEGVPAC CAAVVDHVDT SWGLLPEHLR EMEDAGWEIM AHTASHVAVG NLYLTAPAAA
GDERLSLDGS FLAEHEGEEI VISDGDRTVE NAVAGGGRND DDGIYLDLAE PIGESFDAET
AYVRFTEDRI RDEVVGSKDA LEDMGVEVDG FVSPFGRSDG LVEDLVRDHY AAFANRGGNG
LNALEGLDPH ALGRSSIDGH AVTEAEIESF FDNVAANDTL GIAVGHSQFD ETSPERIRFA
IRAAKERDLE IVTLRAALAD LEDREEDGDG TAADPSESDE TDGAGGESNE SDESNDDSLP
GFGIASTLAG LGTAGYLLSN RRRDDERS