Gene Htur_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3425 
Symbol 
ID8744045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp3531397 
End bp3532056 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID646514007 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404961 
Protein GI284166682 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCG AAGCGACGTT TACGGTGCCG TCCGATCAGT TCCCGCTGGG GAGCGTATTC 
GAACGGCTGC CGGACGTGAC GATCGAACTG GAGCGCATGA TCCCGGCGCG GGACGTGGTT 
GTTCCCTACT TCTGGGTGCG AGGAACGCCC GTCGACGACA TCGAGGACGC CTTCGACGAC 
CATCCCGGCG TCGTCGAGAT CGAATTGATC GATTCCGTCG CGGACGAGTA CCTGTTGCGC 
GTCGAGTGGT CGCTCGAGTA CGCCGGCGTG TTGAGTACGC TGACGGAAAC GAAGCTTCCA 
CTCGTGAAAG CGATCGGGAC GAACCGAGAG TGGACGTTTG ACGTACGCGG CGACGATCGG 
GCCGACATCG CCGACTTTCA GCAGCGCTGT CGCGAACTCG ACATCCCGAT CACGCTGACG 
AAACTGCACG CGCTCACGCC GATCGAAACC GAGGCCGAGG CCGCGTTGAC CGAGCCACAG 
CAGGAGGCCG TGCTCCTCGC CTACGAACGC GGCTACTTCA ACTCACCGCG GGACGTGACC 
ATGGCGGAAC TGGGCGACGA ACTCGGGATC ACCCAACAGG CCGTCGCCTC TCGCCTTCGG 
CGCGGTATCG ACCGGCTCGT CGGGAGCACA CTCGCCGAGA TATCGACTCG CTCTCAGTAG
 
Protein sequence
MATEATFTVP SDQFPLGSVF ERLPDVTIEL ERMIPARDVV VPYFWVRGTP VDDIEDAFDD 
HPGVVEIELI DSVADEYLLR VEWSLEYAGV LSTLTETKLP LVKAIGTNRE WTFDVRGDDR 
ADIADFQQRC RELDIPITLT KLHALTPIET EAEAALTEPQ QEAVLLAYER GYFNSPRDVT 
MAELGDELGI TQQAVASRLR RGIDRLVGST LAEISTRSQ