| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3333 |
|---|
| Symbol | |
|---|
| ID | 8743953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 3434885 |
|---|
| End bp | 3436153 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646513916 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_003404870 |
|---|
| Protein GI | 284166591 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTC AATTGAATCG TCGAAAACTA CTGTCCGGTC TCTGTACCGC CGGACTCGGC
GGCCTCGCCG GCTGTCTCAG TTCGGTTCCC GGGCTCGACT CGACCGACGT CGAGGACGGG
AGCGACGTCG GAGGCACCGA TCGAACGCTC AGACTGGGAA TCATGCAACC GCTCAGCGGC
GACCTCGAGA ACGTCGGACT CCCGATTCGG GACGCCGCAA CACTTCCTAT CAAGCAGATC
GAAGACGAGA TCTCGCTCGA TATCGAGTAC GAAGTCGTCG ACACCGAGAC ATCGCCGTCG
GCGGGCGTCC AGGGTGCGGC CGCCCTGGTC GACGAAGGAT ACCCGATGGT CAACGGCCCG
GCTGCCTCGG ACGTGACGCT GCAGGCGACA CAGCAGGTCC TCATTCCGTA CCGGACCGTC
TGCTGTTCGC CCGGTGCGAC CACGCCGACG ATCACCTCGC TCAACGACGC CGGGCTGGTC
TTCCGGACCG CGGTCTCCGA CTCGCTGCAG GCGGTCGTGC TCGCCGACCG GGCGGCGAAC
GATCTCGGCC ACGACAGCGC CGCGACCCTC TACGCGAACA ACGACTACGG CTGGCAGTTG
AGCCAGGCGT TCGCGCGCTC GTTCCGGAGC GATCACGGCG GGACGGTCTC GGCGCAGATC
CCGCTAACGG AAGGACAGGA CACCTACGAA GCGGCTCTCG AGCGGGCCAG GGAGGACGAC
CCCGAACTGC TCGTCGTGGT CGGCTACCCG GAAACGGGAG GACAGGTTCT CAGAGATCTC
GGAGCCGACG CCCCGGAAGA CGTCCTCGTC ACCGACGGCC TGCGGGACGG AGACCTCCAC
GACGAGATCG ACTACTCGCT CGACGGCATC CGCGGCACCG CGCCGCTGGT CGACGGGCCG
GGGACCGAAA CGTTCACCGA GCTGTTCGAG GACGCCTACG ACGCCGAGCC GAGCGTCTTC
ACGCCCCACT CGTACGACGC GAGCGCCGTC CTGTTGCTCG CGAACGCCTA CGCCGGGCAA
AACGACGGCA CCGCTATCAG AAACGCCATG CAGGCGGTCA CCACAGGCGA CGGCGAGGAG
ATCACACCGG AGACCCTCGC CGAGGGGGTC GACCTCGCGG CCCGGGGTGA CTCCGTCACC
TACCAGGGGG CCTCGAGTTC GGTTGACTTC GACGAGAACG GTGACATCGT CGGCGCGGTC
TTCGAGTACT GGGAGTTCGA CGAAAGCGCG GACGGCGGAA TCACCGAGAT AGAACGGGTG
AGCTCCTAA
|
|---|
| Protein sequence | MSVQLNRRKL LSGLCTAGLG GLAGCLSSVP GLDSTDVEDG SDVGGTDRTL RLGIMQPLSG
DLENVGLPIR DAATLPIKQI EDEISLDIEY EVVDTETSPS AGVQGAAALV DEGYPMVNGP
AASDVTLQAT QQVLIPYRTV CCSPGATTPT ITSLNDAGLV FRTAVSDSLQ AVVLADRAAN
DLGHDSAATL YANNDYGWQL SQAFARSFRS DHGGTVSAQI PLTEGQDTYE AALERAREDD
PELLVVVGYP ETGGQVLRDL GADAPEDVLV TDGLRDGDLH DEIDYSLDGI RGTAPLVDGP
GTETFTELFE DAYDAEPSVF TPHSYDASAV LLLANAYAGQ NDGTAIRNAM QAVTTGDGEE
ITPETLAEGV DLAARGDSVT YQGASSSVDF DENGDIVGAV FEYWEFDESA DGGITEIERV
SS
|
|---|
| |