Gene Htur_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3294 
Symbol 
ID8743914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp3386996 
End bp3387646 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID646513877 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404831 
Protein GI284166552 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCG CCCGATTTCG CATCCAACTG CCCGATGGCA TCTGGGTGCA AACGCTCTCG 
CAGCGGTTTT CCGATGCGAC CTTCGCGCTC CTCTCGGGTT ACCGGTCTGA CGAGACCGCA 
GTCGAACTCG GCGAGGTCAC GACGGACGCC CCCGACGCGG TCGTCGACGC GCTACGGACC 
CACCCCTCGA TCCTCGCGTT CGAACGGTTG GAATCGACCG AGCGGCGCGT CCTCGGGAAG 
TACGAGACGA CCGACACGGC GCTCTACGAC TTCGTCGAGG AGCCGTCGCT GCCGATCGAG 
TTTCCGGTCA CGGTCCGGAA CGGCCGGTTC GAATTCGATC TGACCGGGAC CCGCGAGGAA 
CTCGAGAACC TCCGGGCGAC GCTCGAGGCG TCCGGACTGG CGTACGAACT CCAGTCGCTG 
GTGAGAACCA CGGAGACGGA GTCGCTGCTC ACCGATCGAC AGCGCGAACT CCTCGAGATC 
GCGATACGAG AGGGCTACTT CGAAGTGCCG CGGGACTGCA CGCTCGCGAC GGTCGCCGAA 
GCAGCCGGCA TCGACAAAGC GACGGCCAGT ACGATCCTCC GTCGAGGCGA AGCGAAACTG 
GTGAAATCGG CCCTCGCCGG CCCGGGACGG GCCGACCGAC GCGAGCCGTG A
 
Protein sequence
MIRARFRIQL PDGIWVQTLS QRFSDATFAL LSGYRSDETA VELGEVTTDA PDAVVDALRT 
HPSILAFERL ESTERRVLGK YETTDTALYD FVEEPSLPIE FPVTVRNGRF EFDLTGTREE 
LENLRATLEA SGLAYELQSL VRTTETESLL TDRQRELLEI AIREGYFEVP RDCTLATVAE 
AAGIDKATAS TILRRGEAKL VKSALAGPGR ADRREP