Gene Htur_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3238 
Symbol 
ID8743858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp3338229 
End bp3338882 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID646513821 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404775 
Protein GI284166496 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGA TCGCCGAGTT CCGCCTTCCG GCTGCGGAGA CGACACTGGG GGTCGCCCTC 
GAGCACGTTC CCGACGCCAC GTTCGAACTC GAGTCCTCGG TGTCGAAGAC GCGACCGTCC 
CTCTGGCTCT CCGACGTCGA CCGCGAGCGG GCCGAGGCCG CCTTCGAGGC GGACCCATCG 
GTCGCGGGCC ACGAACTCCT CGTCGAGACC GAGTCCCGGC TGCTGTACGA CGTGACCTTC 
GTGGACGAGA CGGTGCGGCT CAGCGACGAA CTGCTCGCCG AGGGCGGCTC CCTGCTGGAG 
ATGTGGGGCA CCGACGGCTG GTGGCAGGTA CGGGTCCGGT TTCGCGACCG CGACGCCCTC 
GTCGACGCCT ACGACCGCCT CGAGGAGGCG GGTATCTCCG CCGACCTGCG CCGGGTCAGC 
GACGTCAACG GCGTCGCGGA CGACGAGACG CAGCTCACCC CCCAACAGCA GGAGGCCCTC 
GAGGCCGCCC TCGAGCACGG CTACTTCGAG ATTCCCCGCG GCATCTCGAT GGAGGAACTG 
GCCGACGAAC TGGGGATCTC CCATCAGGCG CTGTCCGAGC GGTTCCGCCG GGCCTACGAG 
ACGCTGGTCG ACGACGAACT CCAGCCGGCG AGTAACCGAT CGGACCTCGA GTGA
 
Protein sequence
MSTIAEFRLP AAETTLGVAL EHVPDATFEL ESSVSKTRPS LWLSDVDRER AEAAFEADPS 
VAGHELLVET ESRLLYDVTF VDETVRLSDE LLAEGGSLLE MWGTDGWWQV RVRFRDRDAL 
VDAYDRLEEA GISADLRRVS DVNGVADDET QLTPQQQEAL EAALEHGYFE IPRGISMEEL 
ADELGISHQA LSERFRRAYE TLVDDELQPA SNRSDLE