Gene Htur_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3130 
Symbol 
ID8743750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp3216913 
End bp3217551 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID646513714 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404668 
Protein GI284166389 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAAG CCATCGTGAC CCTCAGCGAC GCGGCGCTCG AGGCGATGGG CTTCGAGGGG 
CTCGTCGCGC TCCTCCGAGA GGCGGGGATC CGCGACGTGG AGATGCTCGA GGACCACGGG 
ACCACCTGCG TTCCGCAGAT CGACGTCGCG GACCGGCTCG ATCCGGAGGG CCTCGAGGAC 
CTCGAATGCG TCAGCGACTG GGAACTGCTC GCCGAGACGG AGACCGGCTA TCGGTACCTG 
CTGGAACTCT CCGCCGCGGA ACTGCCCGCG GACGCGACCG AAGACTACGA CGCGCTGCTC 
GGCAACTGCG AGACCTCGGT GACGGATCGC GGTGTCCTGA TCTCGCTGGT CGGCTCGCAG 
GCGGCCATTC GGGAGATGCT CCGGAACTAC GAGGCCGCCG GCGCCGTCCC CGACCTCTGT 
AAGCTCGCTG AGTACGACGG CGAGGCGAAC CCGCTGGAAT CGCTGACGGG CCGCCAGCGA 
GAGGTCATCG AGACGGCCTA CGAGATGGGG TTCTACGAGG TCCCCCGACG GGCGTCGACG 
GCGGAGATTG CCGGCGAACT CGGGCTCGAG GACGCGACGG TCTCCGAACA CCTCCAGCGG 
GCCGAGCGGA ACCTGCTCAC GACGCAACTC CCGACGTAG
 
Protein sequence
MREAIVTLSD AALEAMGFEG LVALLREAGI RDVEMLEDHG TTCVPQIDVA DRLDPEGLED 
LECVSDWELL AETETGYRYL LELSAAELPA DATEDYDALL GNCETSVTDR GVLISLVGSQ 
AAIREMLRNY EAAGAVPDLC KLAEYDGEAN PLESLTGRQR EVIETAYEMG FYEVPRRAST 
AEIAGELGLE DATVSEHLQR AERNLLTTQL PT