Gene Htur_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3064 
Symbol 
ID8743684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp3143366 
End bp3144025 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID646513648 
ProductRhomboid family protein 
Protein accessionYP_003404602 
Protein GI284166323 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTCGG GGACCGGCGC CGAGTCGTCG ACCGACGACT CGAGCAGTCC GATCGTCGAT 
CTGCTCGCCG TCTTCGTCGT CGTCTTCCTC CTCCAGCAGG TGGCGGCGCT GCTTAGCGTC 
GGGCTGATGG CCGGCCTGTT CGTGCTGGCG CCGCCGCTGT CGACCAACCC GTGGACGGTC 
GTGACGAGCG TCTACGCTCA CGGCGGCGTC GGCCATCTGG TCTCGAACAG CCTCGCGTTG 
ATCGTCTTCG GCTGGCCGGT TGCACGCGCG ACGACGCGGC TCCGATTTCA CGTGTTTTTC 
GCGGTGACGG GTGCGATCGC CGGCGTCGCC CAGATCCTCC TCACGAACGT CGCGGCGTTG 
GTGACCCCGG TTCCCGCAAC GGGCGGCGTG CTCGGCGCCA GCGGCGCGGT CTTCGCCCTG 
CTGGGCTACC TGATCGCCTC GAACCGCCTG TCGGCCAGCC TGGCCTCGTT CGTCGAGGTC 
CCCGCGTGGC TGTCGGCGCT GGTGTTTCTC GGCCTTGCGA TCGCCGTCAC GATGGCCACC 
GCCTCGCCGG GCGTCGCCCT GCTCGCACAC TTCACCGGCC TGTTGCTCGG CCTGATAGCC 
GGCCGCGCTC GAGTCCTCAA CGTCGGCACC CCATCGCGGT CGGGGTCCGC GCGGCTCTGA
 
Protein sequence
MRSGTGAESS TDDSSSPIVD LLAVFVVVFL LQQVAALLSV GLMAGLFVLA PPLSTNPWTV 
VTSVYAHGGV GHLVSNSLAL IVFGWPVARA TTRLRFHVFF AVTGAIAGVA QILLTNVAAL 
VTPVPATGGV LGASGAVFAL LGYLIASNRL SASLASFVEV PAWLSALVFL GLAIAVTMAT 
ASPGVALLAH FTGLLLGLIA GRARVLNVGT PSRSGSARL