Gene Htur_3051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3051 
Symbol 
ID8743670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp3132395 
End bp3133051 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID646513636 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404591 
Protein GI284166312 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG TTCGAATCAC CTTGGACCCC GCCGGCGACT ACGCCCCACC GCTGTACCGA 
CGGCTCGCGG GCGGGGCGCC GTCGCTCGAT CGAGCCCACA TCATCAACTG GAACGTCGCG 
GCGCCGCCGA CGGCGTTCCT GCTGTGGCTT CGCGGCGACT ACCGCCGGTT CGAAGCTGAA 
CTCGAGGCCA GTCGGAACGT CGACGAGTAC GAACTCCTCC CGCTCACAGA TCGGGAGTGT 
CACTGCTTCC TCGAGGGCGC GGTCGCCGAC GCCGCGCGGC TGCTGTTCGA GAACTTCACG 
CAGGGGAGTC TGATCACCGT GCCGCCGATC GTCTGCAACG ACGACGGGAC CAACACGTTC 
TCGATCATCG GGACGGCTGC CGACATCCAG AACGCGGTCG AGGGCGTCCC CGATGGCGTC 
GGCGTCACCG TCGAAGCGGT CGGCGGGGAG ACCGTCGCGC CGAAGAGCGC TATCGGGCGG 
CTCTCCGAGC GCCAGCGCGA GGCCGTCGAA ACCGGCCTCG AAATTGGCTA CTACGACGTT 
CCCCGCGAGG CGACGGCGGC TGACGTCGCC CGCGAACTCG ACTGCGCGAC CGCGACCGCT 
GCGGAACATC TCCAGAAAGC CGAGTCGACG CTGATCGGAG CGTTGCTCGA GCGGTAG
 
Protein sequence
MKRVRITLDP AGDYAPPLYR RLAGGAPSLD RAHIINWNVA APPTAFLLWL RGDYRRFEAE 
LEASRNVDEY ELLPLTDREC HCFLEGAVAD AARLLFENFT QGSLITVPPI VCNDDGTNTF 
SIIGTAADIQ NAVEGVPDGV GVTVEAVGGE TVAPKSAIGR LSERQREAVE TGLEIGYYDV 
PREATAADVA RELDCATATA AEHLQKAEST LIGALLER