Gene Htur_3037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3037 
Symbol 
ID8743656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp3118649 
End bp3119302 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID646513622 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404577 
Protein GI284166298 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGGT TTCGAGCCAC AGTCGTCGTC GAGGATCCCG GGGACTGCCC GATCGCGGAC 
GTGTCGGCGT CTACCGACGA GCCGATCACC TCCGTGACGC GGTCGCGCGC GTCGACCGAC 
GGGACGGTCG TCGAAGAGTT CGGTATCGCC GCCGACGCCG GGGCGGAGTC GATCGACGCC 
GGTACCGCGA CCGACCTGAC CCCGATCCAG GCGAACGAAC GCGAGGAGAT CTATCGATTC 
GAACGCGAGA GCGAGGCCGA CTGCGCGTGC GAAATCGTCG AGGGAACCGG GACGCCCGTC 
TCTTCGGTCC GCGCACAGGA CGGCGCGCTC CAGTTGACGT TTCGCACCCT CGAACTGACG 
GAGATCGCCG ACATCGTCGA CGATCTCCGG GATCGGTTCG AGAGCGTCCT CGTCGAGGAA 
CTCACGCAGG ACCACGACGA CGAGACGTCG GATCCGGTTC TGGTCGACCG CGACCTGCTG 
ACGACGCGCC AGCGCGAGAT CCTCGAGACG GCCCACGAGA TGGGGTACTT CGACTACCCG 
AAAGGCGCGA ACGCGACGGA CGTCGCCGAG GAACTGGGAA TCGCTCGGTC GACGCTCACC 
GAGCATCTGG CCGCCGCCCA GACGAAGCTG CTCGACGCAT TGCTCGAAAA ATAA
 
Protein sequence
MTGFRATVVV EDPGDCPIAD VSASTDEPIT SVTRSRASTD GTVVEEFGIA ADAGAESIDA 
GTATDLTPIQ ANEREEIYRF ERESEADCAC EIVEGTGTPV SSVRAQDGAL QLTFRTLELT 
EIADIVDDLR DRFESVLVEE LTQDHDDETS DPVLVDRDLL TTRQREILET AHEMGYFDYP 
KGANATDVAE ELGIARSTLT EHLAAAQTKL LDALLEK