| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3004 |
|---|
| Symbol | |
|---|
| ID | 8743622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 3087745 |
|---|
| End bp | 3089400 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646513589 |
|---|
| Product | Spermine synthase |
|---|
| Protein accession | YP_003404545 |
|---|
| Protein GI | 284166266 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC GGACCGCGCT CTCCTATCGA CCCGCGAAGC CCGAACTCGC CGTCTTCGTC
TCGGGGATCA CCAGCATGGG GATCGAAATC CTCGCCCTCC GGATCGTCGC GCCGCAGTTC
GGCAGCCACA TCTACACCGT CGGCGGCATC ATGACGGTCT GTCTCGCGGC GCTGAGCCTG
GGCTACTGGC AGGGCGGCAA ACGGGCGATC GATGCGACCA ACCGGGAGAT GACGTGGCTG
TTGCTCGGGA CGGCGGTGTA CATGGCGGTC GTGATCTACG CCAGCGACAT GCTGTTGAGC
CAGACCGCCG CGCTGGCGTT ACCGGCGCGA TACGCCGCCC TTCCCTCGTC GATCATCCTG
TTCGGTCCGC CGACCTACCT GCTCGGCTTC ATCAGCCCCT ACGCGGCCGA ACTCTCCAGA
AAGGAGAGCA CCGGCGAGGC GTCGGGCCAC GTCTACGCGC TGGGGACGAT CGGCAGTATC
CTCGGCTCGG CCGCGACGAC GTTCGTCCTC ATCCCCGCGC TGACCGTCAA CACTATTGGC
CTCGTCTTCG GCATCACCCT CGTCGCGACG GCGATCGCCA TCGAGGCGCC GTCGCTGCCC
CAGAAGCCGA CGCTCGCGAG CGTCGGAATC GCGGTTCTGC TCGTCGTTGC AACCGGCGCC
GGACCGGTCG CGCTCGACCA CCGCGGCGAC GTCGTCTACC AGACCCAGAC CGCCTATCAG
GAACTCGAGG TCGTCGACAA CGGCGACGTC CGGACGCTGT ACTTAGACGG CGCTCGCCAC
AGCGCGATGG ATCTCGAGGA ACCCGACCGC CACGTCTTCG AGTACACGAA GTACTTCCAC
CTGCCGATGC TCATGACTGA CGACGTCGAT GACGTCGATA ACGTGCTGTT CATCGGCGGG
GGCGGCTACA CCGGGCCGAA GGACTTCGAG CGCCGGTACG ACGTCGACGT AGACGTCGTC
GAAATAGACC CGCAGGTGAC CGAGACCGCC GAGGAGTACT TCCGTCTCGA GCACGGCGAG
AACATGACGT CCCACACCAT CGACGGCAAG CAGTACCTCC AGAACACCGA CGAGACCTAC
GACGTGATCG TCCTCGACGC CTACAAGAAG GATCAGGTCC CCTTCCACCT GACCACCATC
GAGTTCATGG AACTCGCCTC TGATCGGCTG GCCGACGACG GGATCTTCCA CGCCAACGTC
ATCGCCGCGC CGAGCGGTTC CGCCGGCGAG TTCTACCGCG CCCAGTGGAA GACGATGGAC
GAAGCCTTCG GCGGCACGTA CGCGTTCCGG ACCTCGAACA CGAACGAGAT CCAGAACATC
GAAATCGCGG CGACCAACGC CGAGACCGAC TTCTCCGAGG CCGACCTCGC CGAGCGAAAC
GACGAGCGCG ACCTCGGCAT CAACCTCTCC GACGAGGTCG ACCACTACAT GGACGCGCCG
GACACCTCGG ACGCGCCCGT GCTCCGCGAC GACCGCGGCG GGGTCGACAG CCTGCTCGAT
CCGATGCTCG GCCAGCGCTA CGTCATCGAG GAGACCGAGG ACGGCTCGAG TGCCGGCGGC
GACGGCGGTG GCTCGGCCGC ACCCGCGGTC GCGCTCGGCA CGACCCCGCT CGTGGTCGCG
GCCGCTCCGA AGAAACGAGC CAGAGTCGAA CGTTAA
|
|---|
| Protein sequence | MTARTALSYR PAKPELAVFV SGITSMGIEI LALRIVAPQF GSHIYTVGGI MTVCLAALSL
GYWQGGKRAI DATNREMTWL LLGTAVYMAV VIYASDMLLS QTAALALPAR YAALPSSIIL
FGPPTYLLGF ISPYAAELSR KESTGEASGH VYALGTIGSI LGSAATTFVL IPALTVNTIG
LVFGITLVAT AIAIEAPSLP QKPTLASVGI AVLLVVATGA GPVALDHRGD VVYQTQTAYQ
ELEVVDNGDV RTLYLDGARH SAMDLEEPDR HVFEYTKYFH LPMLMTDDVD DVDNVLFIGG
GGYTGPKDFE RRYDVDVDVV EIDPQVTETA EEYFRLEHGE NMTSHTIDGK QYLQNTDETY
DVIVLDAYKK DQVPFHLTTI EFMELASDRL ADDGIFHANV IAAPSGSAGE FYRAQWKTMD
EAFGGTYAFR TSNTNEIQNI EIAATNAETD FSEADLAERN DERDLGINLS DEVDHYMDAP
DTSDAPVLRD DRGGVDSLLD PMLGQRYVIE ETEDGSSAGG DGGGSAAPAV ALGTTPLVVA
AAPKKRARVE R
|
|---|
| |