Gene Htur_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2936 
Symbol 
ID8743553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp3009969 
End bp3011993 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content64% 
IMG OID646513521 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003404478 
Protein GI284166199 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATCGC CCTCCTCGAC CGACCCCGGG GTTCAGGCCC GAATCCGACA GCAAGAGGTC 
ATCGCGGAAC TCGGACAGCG AGCGTTGGAG ACAGACGACC TCGATCAGTT GATGCACGAC
GTCTCGGTCG CCGTCGCCGA GACGCTCGAC AACGAGTACT GCAAGGTGCT CGAGCGGTTA
CCGGGCGGCG ACGAAGTCTT CCTGCGACAG GGCGTCGGCT GGCGAGACGG TCTCGTCGGA
ACGGCGACGG TGTCAACGGA TCTCGATTCG CAGGCCGGCT ACACGCTCCT CAGCGAGGAA
CCGGTCATCG TCGACGATCT CCGCGAGGAG GAGCGCTTCT CCGGCCCCGA GTTGCTCACG
AACCACGACG TGGTCAGCGG CGTCAGCGTC ATCATCGGGT CGGTCGAGGA GCCGTGGGGG
GTGCTCGGCA CGCATACGAC CGACCGCAAG GAGTTCACCA CGCACGAAGC CAATTTCGTG
CAAAGCGCCG CGAATATCCT GGCGGCGGCG ATCGAGCGCG CGAACAAGGA AGATCAGCTC
CGCGAGCGCG AAGCCCAACT GAGCGTCGCG ACCGACGCCG CGTCGATCGG ACTCTGGCTG
TGGGACGTAC GGGAAAACGT CTTCACCGCC GACGAGTTTC TCGCGGAAGC GTACGGAATG
GATCCGGAGA TAGTGACGAC GGGCGCGCCG ATCGAGGCGT TCTTCGAACC GGTCCCCGAG
ACCGACGAGG ACGGAATTTG GGACCGACTC GACCGAGCGC TGGAGACGGG CGTGTTCAGC
GCCGAATACC GCATCGAAAA CGGCGACGGC GACGTCATGT GGGTCGTCTC TCGCGGCGAG
GTGGAGTACG ACGCGAGCGG CGACCCGGTT CGGATGCACG GCGCCGTCAC CGATATCACG
GAGCGAAAGC GCCGCGAGCA GCAACTCAAG GAGCGAGAGG CGCGGTATCG GGACCTGTTC
ACCTCGATGT CCGAGGGGTA CTGCGTCATC GAGCGGGTCG ACACGCCGCC AGCGGAGCCG
ATCGATTTCC GCTATATCGA GGCGAACCCG GCGTTCGAGG AGCACACGGG ATTGGCCGAC
GTCGTCGGAA AGACGATCCG AGAACTGGTG CCGGAAGAGC AAGAGGAGTG GTTCGAGACC
TACGATTCCG TCGTGGAGAC CGGCGACCCG GTCAGGTTCG AGCGCGAACT GACGACGCAG
GGGCGGTTCC TCGAGTGCTA CGCGTTTCCG GTCGGTGACG AATCAGACGC ACAAGTGGGG
GTCCTCTTCA CGGACGTCAC CGAACGAGTG GAGCGCGAAC GGCGGCTGGA GGAGCTCGTC
GAACGGCTGG AGACCTCGAA CGATCGCTTG GAGCAGTTCG CCTATGCCGC CAGCCACGAC
CTCCAGGAGC CCCTGCGGAT GGTCTCGAGT TACCTGCAAC TCGTCGAGAG GCGGTACGGT
GACGAGCTCG ACGCCGAGGG GAGAGAGTTT CTCCAGTTCG CGGTCGACGG CGCTGATCGC
ATGCGCGAGA TGATCGACGG GCTGCTCAAG TACTCTCGCG TCGAGACCGA AGGCGATCCC
TTCGAGCCGG TCGATCTGAA CGCGGTCCTC GAGGACGTTC TCGACGATCT CCAACTTCGG
TTCGAAGAGA GTAACGGCGA GGTGACTACC GAGTCCCTCC CGACCGTCGA GGGCGACAGC
GGGCAGTTAC GACAGATCTT CCAGAATCTA CTGGACAATG CCATCGAGTA CAGCGGAGAC
GGCCCGCCGC GCATCCGCGT CTCGGCCGAG CGCCGGTCCG GAGACGACGC CTGGGAGATC
TCGGTCAGCG ACGACGGAAT CGGCATCGAT TCGGAGTACA GCGACCAGAT CTTCGACGTC
TTCCAGAGCT ATCACGAGGG GGAGGGGTAC AACGGAACCG GGATCGGACT CGCGATCTGC
GAGCGGATCA TCGAGCGACA CGGCGGGGAA ATCCGGGTTA CCAGCGAACC GGGCGAAGGC
TCGACGTTTA CGTTCACGCT GCCGGCAGCG AGCGATTCCG ACTAA
 
Protein sequence
MGSPSSTDPG VQARIRQQEV IAELGQRALE TDDLDQLMHD VSVAVAETLD NEYCKVLERL 
PGGDEVFLRQ GVGWRDGLVG TATVSTDLDS QAGYTLLSEE PVIVDDLREE ERFSGPELLT
NHDVVSGVSV IIGSVEEPWG VLGTHTTDRK EFTTHEANFV QSAANILAAA IERANKEDQL
REREAQLSVA TDAASIGLWL WDVRENVFTA DEFLAEAYGM DPEIVTTGAP IEAFFEPVPE
TDEDGIWDRL DRALETGVFS AEYRIENGDG DVMWVVSRGE VEYDASGDPV RMHGAVTDIT
ERKRREQQLK EREARYRDLF TSMSEGYCVI ERVDTPPAEP IDFRYIEANP AFEEHTGLAD
VVGKTIRELV PEEQEEWFET YDSVVETGDP VRFERELTTQ GRFLECYAFP VGDESDAQVG
VLFTDVTERV ERERRLEELV ERLETSNDRL EQFAYAASHD LQEPLRMVSS YLQLVERRYG
DELDAEGREF LQFAVDGADR MREMIDGLLK YSRVETEGDP FEPVDLNAVL EDVLDDLQLR
FEESNGEVTT ESLPTVEGDS GQLRQIFQNL LDNAIEYSGD GPPRIRVSAE RRSGDDAWEI
SVSDDGIGID SEYSDQIFDV FQSYHEGEGY NGTGIGLAIC ERIIERHGGE IRVTSEPGEG
STFTFTLPAA SDSD