Gene Htur_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2889 
Symbol 
ID8743506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp2961191 
End bp2961829 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID646513474 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404431 
Protein GI284166152 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACG AATGTCTCGC GGTCGAATTC CGCGTTCAGA ACGACGATTG TCCGCTTTCG 
GAGGCGACGC GGGAAGTCGA CGTCGAGATC GGTGCGCAGC CGCCACAGCA CCGCAGCGAC 
GGCTACGATC TCCTCAAGTT CAGTTCGCCC AAGAGCGACC GGCTCACTCG ATTACTCGAC 
GACGACGACC GGATCTCGTA CCTGCACGTC TCGCGGACAG ACGGGCGCTA TCGGTACCGC 
TGCCTGTCGA AAGAGCCCTG TGTCGTCCAC CGACTGATCG ACGGCGGACT CATCGTCGAG 
ACGCTGCGAT ACCGCGACGG CGCGGCGATG ATCTTCGGCG CGGTCGTCGG CCGCGACGTC 
CTCAAGGGCG TCATGGAGGC CGCCGGCGAG ACCGTCGGGG TCACGCTCGA GCGCGTCTAT 
CCCCTGCAGG CCGAAGCGAA GGAATCCCCC GGCCACCGAT GGGACCTCAC GCCGGCCCAG 
GAGGAGTGCC TTCGGACGGC CCTCGAGATG GGGTACTTCA CCATCCCCCG GAACGCCTCG 
TCGGAGGCGG TCGCCGACGA GCTCGGGATC AGTAAATCGG CGTTTCTCGA GCGGCTCCGA 
CGTGGCGAGG CGGCGCTGTT TCGCCAGATC TTCAGCTGA
 
Protein sequence
MIDECLAVEF RVQNDDCPLS EATREVDVEI GAQPPQHRSD GYDLLKFSSP KSDRLTRLLD 
DDDRISYLHV SRTDGRYRYR CLSKEPCVVH RLIDGGLIVE TLRYRDGAAM IFGAVVGRDV 
LKGVMEAAGE TVGVTLERVY PLQAEAKESP GHRWDLTPAQ EECLRTALEM GYFTIPRNAS 
SEAVADELGI SKSAFLERLR RGEAALFRQI FS