Gene Htur_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2827 
Symbol 
ID8743444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp2900415 
End bp2903609 
Gene Length3195 bp 
Protein Length1064 aa 
Translation table11 
GC content68% 
IMG OID646513414 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003404371 
Protein GI284166092 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACC GAGCGGGGGA ACGCGGCAGG GACTTCTGGG ACGACGCGGA CGAGACCACC 
GCGCTCCGGC GCTACCGGAC GTTAGTGAAC ACGATCGACG ACGGCCTCTA CCAGCTCGAC
GCCGACGGCA CCGTCGTCGC GGTCAACGAC GTGATCGTCG ACCGAACGGG CTACGCGCGC
GACGAGTTGA TCGGCGCCCA CGTCTCCCGC ATCCTCGACG CGGACGACGT CGCCCGGGTC
GAACGCGGGA TCCGCGAGGG GCTGTCGGCC GATCGAGACG TCGCCAGCGT CTTCGAGGTC
GCGCTCGAGA CGGCTGACGG CGACCGCGTC CCGACCGAGC TCCGGGTGAA CCCGCTGCTC
GAGGACGGCG ACTTCCGCGG CACGGTCGGC GTCGCCCGCG ACGTCACCGA TCGAAGACGC
AGCCAGGAGC GCGCGGAGAC GGCGATCGAG TCATACGAGA CGATCACCAC CGTCCTTGAC
GAGGCCGACG TGGGCGTCTT CGTCCTCGAC GACTCCTTCG ACGTCGCCTG GGCCGACGAG
ACCGCGGGCG AGTACTTCGG GTTCGACCGG GACGCGGTCA TCGGTCGCGA CAAGCGCGAA
CTGATCGAGG AGACGATCCG TCACCGCGTC GCCGACGGCG ACGCGTTCGC CGACACCGTC
CTCGCGACCT ACGAGGACAA CAGCTACGAC GAGCGCTTCG ACTGTCACGT CACGGCCGGT
TCCGACGGGG AGGAACGCTG GCTCGAGCAC CGGAGCCGAC CGATCGAGTC TGGCCGGTAC
GCCGGCGGGC GGATCGAACT CTACTACGAC GTCACCAACC GCCATCGCCG GGCAACCCAG
CTGCGGCGAC TGAACGAAGC CGTCAGCGAG TGGCTCGAGG AGTCCTCGCG CGAGGCGGTC
GCCGAGCGGG CCACGGACCA CCTCCGGGAC ATCCTCGGGA TGACGCTCAA CGGAATCTAC
CTCTACGACG CCGACGCGCC GGCGCTCAGA CCCGCGAGCT GGACGGAGGC GACCGAGCGC
CTGCTGGGCG ACCTGCCGAC GTTCGGACCC AACGAGGGGA TCGCCTGGCG CGTCTTCGAG
TCGGGCGAGC CGGCGTTCCA CGCGGACGTG AGTACTGCTC CGGACGCGTA CGATCCGGAC
ACGCCGATCG GCAGCGAGAT GATTCTGCCG ATCGGGGACC ACGGCGTCGC CTTCATCAGT
TCCGCCGAGC GCGACGCCTT CGACGAGGGC GACCGGATGC TCGCCCGGGT CGTCGCCTCG
AGCCTCGAGG CGACCTTCGA CCGGCTCCGC CACGAGCGCC GCCTCGAGCG CGAGCGAGAT
CTGACCGACC GGATCCTCGA TACCATTCCC GCGGGCGGCC TCGTGCTCGA CGCCGACGGG
GAGATCACGC GGATCAACGA CCGCGCCATC GAACTCCTCG GTGTCGAGAA GCCGGAGACG
TTCTCCCGGG AGGACAGGCT ACTCTACGAC GAGGACGGCC GACGGCTGTC GGCCGAGGAG
TACCCGTCGT CCCGGGCGTT CGCGACGGGA GAACCGATCT ACGATCGCGT GCTGCGGATC
GAACGCCCGG AGGGGGGCGA AGACGGGGAC GGGGAGCGAC ACTGGCTGTC AGTCAGCGCC
GCCCCGATCG CCGACGACGA CGGCACGATC GATCGCGTCG TCACCGCCGT GGAGGACGTC
ACCGACCTCA AGGAGCGCGA ACGCGAACTC GAGAGCGAGC TGCGCGAGGT GTTCGGACGG
GTCTCGGACG CGTTCTACGC GGTCGACGAG GAGTACCGTT TCACGCACGT CAACGAGCGG
GCGGCGGTGC TCCTCGGGGT CGACGAGGAC GACCTGCTCG GCCGGCGTCT CGGAGACGTC
TATCCGGAGA CGGACGAGGT TGAGCAGATT CGAAACCGCT TCGACGAAGC GATGGAGACG
CAGGAATCGG TCGGCTTAGA ACACTACTCC GAGCTGCTCG GGTTCTGGCT CGAGGCGACT
ATCTACCCCT CCGAGAGCGG CGTCTCAGTC TACTTCCGCG ACGTTACCGA GCGCAAGGAG
CGCGAGCAGG AGCTCCGGGA GAGCGAAGCG AAGTTCCGAA CCCTCGCGGA GAATCTCGAC
GAGATCGTCT GGATGTCGAC GCCCGACGGC GAGGAGATGC TGTACATCAA CCCGGTCTAC
GAGGACGTCT GGGGCCGGAG TCGCGAGTCG CTCTACGACG ATCTGAACGC GTTCCTCGAG
GCGATCCACC CGGACGACCG AGCGCGGGTT CGGGAGGCCT ACGCGGCCCT GCCCGAGACC
GCCTACGACG AGGAGTTTCG CGTCGTCCGG CCGGATGGCG CCGTCCGGTG GGTCCACGCC
CAGGCCGTCC CGGTCTGCAA CGACGGCGAG ATCGTCCGGA TCGTCGGCAT CGCGACCGAC
ATCACCGACC GCCGGGAGTA CCGGCGCAAG CTCGAGGCCT CGAACGAGCG CTTAGAGCAG
TTCGCCTACG CCGTCTCCCA CGACCTGCAG GAGCCCCTGC GGATGATCAC GAGCTACCTC
CAGTTGCTCG AGTCCCGGTA CGCGGACGAA CTGGACGAGG ACGCCGCGGA GTTCATCGAG
TTCGCGGTCG ACGGGGCCGA GCGCATGCGC GAGATGATCG AGGGCCTCCT CGAGTACTCC
CGGGTCACCA CCCGCGGCGA CCCCCTCGAG CCGGTCGATC TCGAGCGGGT CGTCGACGAG
GTCCTCGCGG ACCTACAGTT TCGGATCGAG GACGAAAACG CCGAGATATC GATCGAGTCG
CTCCCCCGCG TCGAAGGCGA TATCGACCAG CTCCGGCAGG TGTTCCAGAA CCTCGTGGAC
AACGCCATCG AGTACAGCGG CGACGAACCA CCGCAGATCG AGATCACCGC CGAGCGACGC
GAGGTCTCCC GCGCGGCCGC GGACGGGCCG GCCGATCCGA ACCCGCGAGC GGACGGGATC
GCCGCGGAGA GCGACGACGA GTGGGTGATT TCGGTCGCAG ACGAGGGGAT CGGGATCGAT
CCGGAGGACA CCGACCGCAT CTTCGAGGTG TTCGAGCGGT TGCACACCCG CGAGGAACAC
GAGGGGACGG GGATCGGGCT GGCGCTCTGT CAGCGAATCG TGGAGCGACA CGGCGGCGAG
ATCTGGGTCG AGTCGGAGCC CGGCGAGGGA GCGACGTTTT CGTTCACGCT GCCGGCGGCC
GACGACGTGG CGTAA
 
Protein sequence
MSDRAGERGR DFWDDADETT ALRRYRTLVN TIDDGLYQLD ADGTVVAVND VIVDRTGYAR 
DELIGAHVSR ILDADDVARV ERGIREGLSA DRDVASVFEV ALETADGDRV PTELRVNPLL
EDGDFRGTVG VARDVTDRRR SQERAETAIE SYETITTVLD EADVGVFVLD DSFDVAWADE
TAGEYFGFDR DAVIGRDKRE LIEETIRHRV ADGDAFADTV LATYEDNSYD ERFDCHVTAG
SDGEERWLEH RSRPIESGRY AGGRIELYYD VTNRHRRATQ LRRLNEAVSE WLEESSREAV
AERATDHLRD ILGMTLNGIY LYDADAPALR PASWTEATER LLGDLPTFGP NEGIAWRVFE
SGEPAFHADV STAPDAYDPD TPIGSEMILP IGDHGVAFIS SAERDAFDEG DRMLARVVAS
SLEATFDRLR HERRLERERD LTDRILDTIP AGGLVLDADG EITRINDRAI ELLGVEKPET
FSREDRLLYD EDGRRLSAEE YPSSRAFATG EPIYDRVLRI ERPEGGEDGD GERHWLSVSA
APIADDDGTI DRVVTAVEDV TDLKEREREL ESELREVFGR VSDAFYAVDE EYRFTHVNER
AAVLLGVDED DLLGRRLGDV YPETDEVEQI RNRFDEAMET QESVGLEHYS ELLGFWLEAT
IYPSESGVSV YFRDVTERKE REQELRESEA KFRTLAENLD EIVWMSTPDG EEMLYINPVY
EDVWGRSRES LYDDLNAFLE AIHPDDRARV REAYAALPET AYDEEFRVVR PDGAVRWVHA
QAVPVCNDGE IVRIVGIATD ITDRREYRRK LEASNERLEQ FAYAVSHDLQ EPLRMITSYL
QLLESRYADE LDEDAAEFIE FAVDGAERMR EMIEGLLEYS RVTTRGDPLE PVDLERVVDE
VLADLQFRIE DENAEISIES LPRVEGDIDQ LRQVFQNLVD NAIEYSGDEP PQIEITAERR
EVSRAAADGP ADPNPRADGI AAESDDEWVI SVADEGIGID PEDTDRIFEV FERLHTREEH
EGTGIGLALC QRIVERHGGE IWVESEPGEG ATFSFTLPAA DDVA