Gene Htur_2789 details

Gene Information

• Locus tag: Htur_2789
• ID: 8743404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: +
• Start bp: 2862059
• End bp: 2862778
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 646513376
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003404335
• Protein GI: 284166056
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTACC TCGACGTTCG GCTCCGCCAG CCCGACTGGA TGCTCCATCC CATGCAGCTG 
TTCATCCGCG AGGGAGACGC GGTCCGCTAC GAGGAACTGC GCACGTGGAA CATCCTCGGC 
CCCGAGGGCG ACCGCGAGTA CGAACTGTTC TACGCCGAGG CCGACCGCGA GGCGTACGTC 
GACGCCATCG AGGCCGTCGA TTCGGTCCGC TGGTACGACC TGACGCCGAT CGACGACGAC 
TCGTTCTACG TCTACATCTG CCAGGAGACT CGCGAGGAAG ACGTGCGCTG GCGGCAATCG 
TTCGCCGCGC TCGATCTCGT TGTCGTCCCG CCCGTAATCT ACGACTCCGA GGCCGCGTTC 
TACATGACCG TCGTCGGCGC CGGCGAGGAC CTGCAGGCGA TGCTCGAGGG GCTCCCCGAC 
GAGATCGACG TCACCGTCCG CGCGATCGGG GAGTACGACC GCCGGCACGC ACCGCTGACC 
GGTGGTCTCA CCGAGCGTCA GCTCGAGGCC GTTGCAGCCG CGGTCGAGGT CGGCTACTAC 
GCGGTTCCGC GCGAGGCGGG ACTCGAGGCC GTCGCCGAGC GGCTGAACTG TGCCGCGAGC 
ACGGCCGGAA CGCTCCTCCA AAAGGCGCAG GCGCGGGTGA TGCAGCGACT CGTCCGACAG 
CGCGGGCGAG GTCTCCTGGA GGGCGAGACG AACGCGACCG CTCTCGATGC GGGGAAATAG 

 

Protein sequence

MKYLDVRLRQ PDWMLHPMQL FIREGDAVRY EELRTWNILG PEGDREYELF YAEADREAYV 
DAIEAVDSVR WYDLTPIDDD SFYVYICQET REEDVRWRQS FAALDLVVVP PVIYDSEAAF 
YMTVVGAGED LQAMLEGLPD EIDVTVRAIG EYDRRHAPLT GGLTERQLEA VAAAVEVGYY 
AVPREAGLEA VAERLNCAAS TAGTLLQKAQ ARVMQRLVRQ RGRGLLEGET NATALDAGK