Gene Htur_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2716 
Symbol 
ID8743330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp2790721 
End bp2791386 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content49% 
IMG OID646513303 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404263 
Protein GI284165984 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATA TCAAAGCAGT CGTCCGAGTC GAGCACCCTG ACATAGTGCT CACAAAGACA 
GTCACTCACG ACCAGAGTTC GAAAGTCGAG TCGGTGTTAG AGGCAGGAAC TGACCCTACA 
TCGGGGAAAT TCTTCTATCG CATACAGTCA TCTGATTTCC GCCAGTTCGA AGACGGATTG 
CGGAACGATC ACACCATTGG CGAGTTTGAA CGAGTTATTG AAACCAGAGA CGAGAAGGCG 
ATCTATAGTT TCGAGTATAC AGACGAAGCG AAGATCATCT CACCAATTAT TTCGACCGCG 
AATGGTATCA TACTCGATAT GAAGAACGAC AGAAACGGTT GGATTCTAAC AGTATGGATG 
CCCGACCGGA CGAATCTGGC CCCTCTATGG GACTATGCAG AACAGAACGA CATTGATATC 
GATTTACTGC GCGTGAACGA ATACGCTAGT TTAGGGAATA CGGACGCAGG ATTGACCGAT 
AGCCAACGAG AGGCACTCCT CGTCGCACTC GAGATAGGGT ATTTCGAAGA CCCACGGAAC 
GCAACTCTCA GCGAAGTCGC CGCTAATCTG GATATCTCTC AACCTGCAGC CAGTGGTCTC 
CTTCGGCGTG GGACCAAACG ACTCATCATT TCTTCCCTGA TGGATGACAG TGAAAAGCCA 
GATTGA
 
Protein sequence
MTDIKAVVRV EHPDIVLTKT VTHDQSSKVE SVLEAGTDPT SGKFFYRIQS SDFRQFEDGL 
RNDHTIGEFE RVIETRDEKA IYSFEYTDEA KIISPIISTA NGIILDMKND RNGWILTVWM 
PDRTNLAPLW DYAEQNDIDI DLLRVNEYAS LGNTDAGLTD SQREALLVAL EIGYFEDPRN 
ATLSEVAANL DISQPAASGL LRRGTKRLII SSLMDDSEKP D