| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_2698 |
|---|
| Symbol | |
|---|
| ID | 8743312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 2772176 |
|---|
| End bp | 2773837 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646513285 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_003404245 |
|---|
| Protein GI | 284165966 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3413] Predicted DNA binding protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCG GGAACACACT CGCCGACGTC GCCCTCGAGA CGCTCCCCAT CACCGTCGCG
GTCGTCGACG AGAACGGAGA GATTCTGCTG ACGAATAAGT CCTGGCGGGC GTTCGGTCCC
GACGACCACC GAACGGATCA CGTCGGCGTC AACTACATCG CGACGGCGGA AATGGACGCC
GACACCGACG AATACGCCAG ACGGGCGGTC GAAGGAATCG AGGCGGTTAT CGACGGCGAG
CGGGAGACGT TCACGATGGA GTACCCCTGT CACTCGCCCG AGCGAAAGCA GTGGTTCCTG
ATGTGGGCGA AGCGATTCCG CATCGGTGGG GAGGTCCGCG TCTCGGTGGT CCACCTCGAT
ATCACCGAAC GCAAACTGGC CGAGATCACC GCCGAGGAGA CCGCCGCGGA ACTCCGCGAG
GAACACCGGA CGCTCGAGCA CGTCCTCGAG CGCGTCGACG GCCTGCTCCG GGACGTCACC
GACGCCGCCG TCGGCGCGAC GACCCGCGAA GAGATCGAAC GCGCGGTCTG TTCGCGTCTC
GCCGACACCG AACCGTACGT GCTCGCCTGG ATCGGGCGCG TCGACGTCAC GAACCGCCGC
CTCTCGCCGC GCGAGTGGGC CAGCGCCGGC GACGTTCCCC TCGAGGACGG CGACCTCGTC
CTGGGGTCGG ACGAGAGTCA CCCCGCCGTT CGGGCGCTCG CAGACGGGGA CGCGCAGGTG
GTACAGGATC TCGACTCGTT CGACGACGCG GAGCGATGGT GGCCCGAGGG TGCCGGCGAT
CGGTTTCGGT CGGTCGCCGC GTTGCCGCTT CGCTACGGCG ACGTCGCGTA CGGGGTGCTC
GCGGTGTTCG CCGACGAGCC GTCGGCCTTC TCGGAGCGCG AACTGCTCGT CCTCGACTCG
CTGGCCGGGA CGATCTCGAC CGCGATGAAC GCGATCGAGG CGCGGCGGAT GCTCGCGACC
GACGACGTCG TCGAACTCGA GCTCGCGATC GGGGATCCCG ACCTGTTCGT CGCGGCGCTG
GCGACCGAAC TCGAGGCGGC GGTCACCTTT CGGGGATTGA CCGACGACGA GGACGGGACG
CCGATCGCGT TCTTCCACGC CGACCGTGCC GTCGACGGCG CCCCGGACGC GGCGGCGATC
GACGGCGTCG CCGACGTCCG AATCCTGTCG ACGTACGACG GTGGAACGCT CCTCGAGGCC
GCCGTCGACG ACGACATCGT GCGGACGATC TCCGAACACG GCGGGACGGT TCGGCGGTTC
GAGACCAGAG GCGATACGCC CCAGGCCGAT TCCCGGACCG CCGCCGGCGA CGGGATCGTC
GATCTCACCG TCGATCTCCC GAACGGACAG GCCGCACGCT CGGTCTACGA CCGGTTGGAC
CGGCGGTACG ACGCGGTCGA GTTGATCAGC TACCACGAGA CTGAGCGCCC CAGACGAACG
CCGGGGGACG TGATGGCGCG ATTGGAGTCG TCGCTGACCG ATCGCCAGCA GACGGCGCTG
CGGAAGGCCT ACTACGCCGA TTACTTCGAG TGGCCCCGCA ACGTCTCCGG CGAGGAACTC
GCCGAGTCGA TGGACATCTC CCGATCGACG TTCCACCAGC ACCTCCGGAC CGCACAGCGG
AAGCTGCTGG ACGAACTGTT CACCGGGGAC CCCACTAGGT AG
|
|---|
| Protein sequence | MDAGNTLADV ALETLPITVA VVDENGEILL TNKSWRAFGP DDHRTDHVGV NYIATAEMDA
DTDEYARRAV EGIEAVIDGE RETFTMEYPC HSPERKQWFL MWAKRFRIGG EVRVSVVHLD
ITERKLAEIT AEETAAELRE EHRTLEHVLE RVDGLLRDVT DAAVGATTRE EIERAVCSRL
ADTEPYVLAW IGRVDVTNRR LSPREWASAG DVPLEDGDLV LGSDESHPAV RALADGDAQV
VQDLDSFDDA ERWWPEGAGD RFRSVAALPL RYGDVAYGVL AVFADEPSAF SERELLVLDS
LAGTISTAMN AIEARRMLAT DDVVELELAI GDPDLFVAAL ATELEAAVTF RGLTDDEDGT
PIAFFHADRA VDGAPDAAAI DGVADVRILS TYDGGTLLEA AVDDDIVRTI SEHGGTVRRF
ETRGDTPQAD SRTAAGDGIV DLTVDLPNGQ AARSVYDRLD RRYDAVELIS YHETERPRRT
PGDVMARLES SLTDRQQTAL RKAYYADYFE WPRNVSGEEL AESMDISRST FHQHLRTAQR
KLLDELFTGD PTR
|
|---|
| |