Gene Htur_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2580 
Symbol 
ID8743193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp2651710 
End bp2652387 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID646513169 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003404130 
Protein GI284165851 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGA TCGCAGAACT CACGCTTTCG ACCGACGAAT TCGCGCTCGC GGAGACGTTC 
CAGCAACTGC CGGAGATGGA GGTTCGCGTC GAAAGCGTCG TCGCCGAGGG CCCGGCTCGG 
ACGATGCCTC TCGTCTGGTT CTCGAACGTC GACCCCGACG CGATCGACGA GGCCCTCGAG 
GCCGATCCCA CCGTCGCCGA CTCCCAGCAA CTCCTCGAGA ACACCGACGA CGACGAGTGG 
TTCTACCGCC TCCAGTACGG CGAGGACGTC GGCTCCGTCT GTAGCGCGGT CTACACCAAC 
GGCGGCACGC TGCTCGACGC CCAGGTCACC GAGGGCCAGT GGACGCTTCG CCTGCTCTTT 
CCCGAGCGCG AGGAGCTCTC CGACGCCGTC TCGGCCATCG AGGAACAGGG CGCTCGCGTC 
GACGTCCGCC GGATGGTCGA AGCCGGCCAG GACGAGGACC TCGAGACGAC GGCGGCGCTG 
ACCGAACCGC AGCAGGAAGC GATCGCCGAG GCCTACCGCC AGGGCTACTA CGACGTCCCG 
CGGGAGATCT CGCTCGAGGA ACTGGCCAAC GAACTCGATA TCTCCCATCA GGCGCTCTCC 
GAGCGACTCC GCCGGGCCAA CCGCGTGCTC GCCAGCGAGC AACTCGACGA GCCGACGGGC 
GAACTGGCGA CCGAGTGA
 
Protein sequence
MTTIAELTLS TDEFALAETF QQLPEMEVRV ESVVAEGPAR TMPLVWFSNV DPDAIDEALE 
ADPTVADSQQ LLENTDDDEW FYRLQYGEDV GSVCSAVYTN GGTLLDAQVT EGQWTLRLLF 
PEREELSDAV SAIEEQGARV DVRRMVEAGQ DEDLETTAAL TEPQQEAIAE AYRQGYYDVP 
REISLEELAN ELDISHQALS ERLRRANRVL ASEQLDEPTG ELATE