| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_2570 |
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| Symbol | |
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| ID | 8743183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013743 |
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| Strand | - |
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| Start bp | 2640956 |
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| End bp | 2643220 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646513159 |
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| Product | AAA family ATPase, CDC48 subfamily |
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| Protein accession | YP_003404120 |
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| Protein GI | 284165841 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA CCGTTAAACC ACTGAAACAG AAGGACGCCG GCCGCGGACT CGCCGCGATC
GATCGCGTCT CGATGCGCGA ACTCGATCTC GAGAACGGCG ACTACATCGT AATCGAGGGC
ACGGGCGACA GCCAGGCCGT CGCGCGCGTC TGGCCCGGAT ACCCCGAAGA CGAGGGGCGA
GGGATCATCC GAATCGACGG CCGCCTCCGC CAGGAGGCCG ACGTCGGGAT CGACGACAAC
GTCAGCGTCG AGCCCGCCGA CGTCAACCCC GCCAAGTCGG TCACGGTCGC GCTGCCCCAG
AACCTCCGCA TTCGCGGAGA CATCGGGCCG CTCGTCCGCG ATAAGCTGAG CGGACAGGCC
GTCACCGAGG GCCAGACGGT GCCGTTCTCG CTCTCGTTCG GTCCGATGGC CAGCTCCGGC
CAGTCGGTGC CGCTGAAGAT CGCGAGCACC TCGCCGTCGG GCACGGTCGT CATCACGGAC
TCGACGAACA TCGAGATCTC CGAGACGCCC GCCGAGCAGG TCAGCTCGGG TAGCGGCGCC
TCCGCCGAGG GCGTCCCGAA CGTCACCTAC GAGGACATTG GCGGCTTAGA CGACGAACTC
GACCAGGTCC GCGAGATGAT CGAGCTGCCG ATGCGCCACC CCGAGCTGTT CCAGCAGCTC
GGCATCGAGC CGCCGAAGGG CGTCTTGCTG CACGGCCCGC CGGGCACCGG GAAGACCCTG
ATGGCCAAGG CCGTCGCCAA CGAGATCGAC GCCCACTTCG AGACGATCTC CGGTCCGGAG
ATCATGTCGA AGTACTACGG TGAGAGCGAG GAGCAACTCC GCGAGGTCTT CGAAGAGGCC
GAGGAGAACG CCCCCGCGAT CATCTTCATC GACGAGCTCG ACTCGATCGC CGCCAAGCGC
GAAGACGCCG GCGGCGACGT CGAACGACGC GTGGTCGCCC AGCTCCTCAG CCTGATGGAC
GGCCTCGAGG AACGCGGTCG CGTCACCGTC ATCGCGGCGA CCAACCGCGT CGACGACATC
GATCCCGCGC TCCGCCGCGG CGGTCGCTTC GACCGCGAGA TCGAGATCGG CGTCCCGGAC
AAGGACGGCC GCAAGGAGAT CCTGCAGGTC CACACCCGCG GGATGCCGCT CCAGGAGTCG
ATCGACCTCG ACCAGTACGC CGAGAACACC CACGGCTTCG TCGGGGCCGA CTTAGAGAGC
CTCGTCCGCG AGGGCGCGAT GAACGCCCTG CGTCGCATCC GTCCCGACCT CGACCTCGAG
GAGGACGAGA TCGACGCCGA GATCCTCGAG ACCCTCGAGG TCACCGAGGA CGACTTCAAG
GACGCGATCA AGGGCATCCA GCCCTCGGCG ATGCGGGAGG TCTTCGTCGA GATCCCCGAC
GTCACCTGGG ACGACGTCGG CGGCCTCGAA GACACCAAGG AGCGCCTCCG CGAGAACGTC
CAGTGGCCGC TGGACTACCC CGAGGTGTTC GACGAACTCG ACATGCAGGC CGCCAAGGGC
GTCCTCATGT ACGGCCCGCC GGGTACGGGG AAGACCCTGC TCGCGAAGGC CGTCGCCAAC
GAGGCCCAGT CGAACTTCAT CTCGATCAAG GGCCCCGAAC TGCTGAACAA GTACGTCGGG
GAGTCCGAGA AGGGCGTCCG TGAGGTCTTC GAGAAGGCGC GGTCGAACGC ACCGACCGTG
ATCTTCTTCG ACGAGATCGA CTCGATCGCG GGCCAGCGCG GCCGCCAGCA GAGCGACTCC
GGCGTCGGCG AACGCGTCGT CAGCCAGCTG CTGACCGAAC TCGACGGCCT CGAGGAACTC
GAGGACGTCG TCGTGATCGC CACGACCAAC CGGCCGGACC TGATCGACAA CGCCCTGCTC
CGTCCCGGAC GGCTGGATCG CCACGTCCAC GTGCCCGTCC CCGACGAGGA GGGTCGTCGG
AAGATCTTCG AGGTCCACAC CCGGGGCAAG CCCCTGGCCG ACTCGGTCGA CCTCGACTGG
CTCGCCGCGG AGACGGAGGG CTACGTCGGC GCCGACATCG AAGCCGTCAC GCGCGAGGCC
TCGATGGCCG CCAGCCGCGA GTTCATCAAC TCGGTCGACC CCGAGGAGAT GGCCGACACC
ATCGGCAACG TCCGCATCAG CAAGGAGCAC TTCGAGCACG CCCTCGAGGA GGTCAACCCG
AGCGTGACCC CCGAGACCCG CGAGCAGTAC GAGGAGATCG AAGAGCAGTT CGACACCGCC
GAACCGGCTC AGGAAGAGGA CCAGCTCGGT CGCACCTTCC AGTAA
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| Protein sequence | MKLTVKPLKQ KDAGRGLAAI DRVSMRELDL ENGDYIVIEG TGDSQAVARV WPGYPEDEGR
GIIRIDGRLR QEADVGIDDN VSVEPADVNP AKSVTVALPQ NLRIRGDIGP LVRDKLSGQA
VTEGQTVPFS LSFGPMASSG QSVPLKIAST SPSGTVVITD STNIEISETP AEQVSSGSGA
SAEGVPNVTY EDIGGLDDEL DQVREMIELP MRHPELFQQL GIEPPKGVLL HGPPGTGKTL
MAKAVANEID AHFETISGPE IMSKYYGESE EQLREVFEEA EENAPAIIFI DELDSIAAKR
EDAGGDVERR VVAQLLSLMD GLEERGRVTV IAATNRVDDI DPALRRGGRF DREIEIGVPD
KDGRKEILQV HTRGMPLQES IDLDQYAENT HGFVGADLES LVREGAMNAL RRIRPDLDLE
EDEIDAEILE TLEVTEDDFK DAIKGIQPSA MREVFVEIPD VTWDDVGGLE DTKERLRENV
QWPLDYPEVF DELDMQAAKG VLMYGPPGTG KTLLAKAVAN EAQSNFISIK GPELLNKYVG
ESEKGVREVF EKARSNAPTV IFFDEIDSIA GQRGRQQSDS GVGERVVSQL LTELDGLEEL
EDVVVIATTN RPDLIDNALL RPGRLDRHVH VPVPDEEGRR KIFEVHTRGK PLADSVDLDW
LAAETEGYVG ADIEAVTREA SMAASREFIN SVDPEEMADT IGNVRISKEH FEHALEEVNP
SVTPETREQY EEIEEQFDTA EPAQEEDQLG RTFQ
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