| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_2340 |
|---|
| Symbol | |
|---|
| ID | 8742947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 2406337 |
|---|
| End bp | 2408004 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646512926 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003403893 |
|---|
| Protein GI | 284165614 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCG AGCTCGTCCC GGCGGAGTCG CTGCTGTCGC CGCCGTACGA CGGCAACGTC
GCCAATCTCC TCGAGCGGAC GCTCACGGAG TACCCCGACG AGACGGCGAT CGAACACGAC
GGCGAGGCTG TCACCTACCG CGAACTGGAC GCGACGATCG ACCGCTACGA GCGCGGGCTC
CGCGCCGCCG GCCTCGAGAC CGGCGACCGG GCCTGCGTCT ACGTGCCCAA CGGCATCGAC
TTCTGTGCGG TGATCTGGGC CTGCTGTCGG GCCGGGATCA TCGCCAGCCC GCTGAACCCG
GCCTATCGGC GCCGCGAGAT CGAGTATCAG GTCGACCACG CCGCCGCGGC GGCGATCGTC
GTCGCCGGGG ACCCCGTCGA CCACGTCGTC GACGCCGTCG CCGACCTCGA GGCCGAGATC
CTCACGACTG CGCTGGCCGG CGACGTCGAC GGCGAGTGCG ACTCGCTCGC TGACCTCGGC
GACGAACCCG TGGGCATCGT CGCCGGGGAC GACAGTGGGG CAACGACCAG CGACGGCGAC
GGCGGTGCCG CGACGACCGC CGACAGTCGT TCGGTCGAGA TCGTCGATCG GTCGGACGAC
GACGTGCTGC TCCAGCCGTA CACCTCGGGG ACGACCGGCG ACCCGAAGGG CGTCCTACTG
ACCCATCGGA ACTTCCGCGT CCAGATCGCC ACCAGCGTCT CGGGGTACAG CGCCAGCCCC
GTTCAGGGCG ACGCACTGAT CATCCTCCCG ATGTACCACA TCACGGGGCT GCTCCAGATG
ATGGCCGCGC TGTGTGCCGG CCGGACGCTC CACCTCGTGC GGCCCGACCG GTGGGACCCC
GAGCGCGTCC TCGAGTTGCT CGACGAATAC GACGTCCCGT CGTTCGTCGG GGTCGCGACG
ATGTTCAACG ACCTGCTCAA GGCATACGAT CCCGAGGCGT ACGACCTCGA GTCGCTCCAG
AAAGCGGGAC AGGGCGGTGA TAAACTCCCC GAGCCCGTGC AACGGGAGTT CGAGGAGACG
TTCGACGCGC CGCTCTTGGA GGGGTACGGC CTCACGGAGA CGACCGCGAC GACGCACACG
CTCCGCCGGT CGACGCTCGG GATCCGCGCC GGCAGCATCG GGCAACCGCT CGGCCACACG
CGCTCGAAGA TCGTCGACGA GAACGGCGAG GAGGTCGACG TCGGTGAAGA GGGCGAGATC
CTCGTCGATG GCCCACAGGT GATGAACGGT TACTATAAGA ACCCCGAGGC GAACGAGGAG
GTCTTTACGG AAGATGGCTT CTTCCGGACC GGCGACATCG GCTCCCGCGA CGAGGACAAC
TACTACTACG TCAAGGGCCG CGAGAAGGAG ATGATCCTGA CGGCGGGATA CAACGTCTAT
CCCCGAGAGA TCGAGGAAAC GCTGTACGAT CACCCGGGCG TGCTCGAGGC GGCGGTCTTC
GGCGTTCCCG ACGACCGACG GGGCGAGACG GTCGCGGCCG CCGTCGTCAC GGGCGACGGC
GCGGACCTCG ACGAGGACGA GATCGAGGAG TACGTCCTCG GGGAACTCGC GCCGTACAAA
CACCCGCGGT ACGTCGAGAT CCGCGAGGAA CTCCCCAAGA CGGGCAGCGG CAAGGTGCGG
AAGACCGTCC TCCGCGAGGA GTTCCGGGAG GCATACGTGA GCGGATGA
|
|---|
| Protein sequence | MDRELVPAES LLSPPYDGNV ANLLERTLTE YPDETAIEHD GEAVTYRELD ATIDRYERGL
RAAGLETGDR ACVYVPNGID FCAVIWACCR AGIIASPLNP AYRRREIEYQ VDHAAAAAIV
VAGDPVDHVV DAVADLEAEI LTTALAGDVD GECDSLADLG DEPVGIVAGD DSGATTSDGD
GGAATTADSR SVEIVDRSDD DVLLQPYTSG TTGDPKGVLL THRNFRVQIA TSVSGYSASP
VQGDALIILP MYHITGLLQM MAALCAGRTL HLVRPDRWDP ERVLELLDEY DVPSFVGVAT
MFNDLLKAYD PEAYDLESLQ KAGQGGDKLP EPVQREFEET FDAPLLEGYG LTETTATTHT
LRRSTLGIRA GSIGQPLGHT RSKIVDENGE EVDVGEEGEI LVDGPQVMNG YYKNPEANEE
VFTEDGFFRT GDIGSRDEDN YYYVKGREKE MILTAGYNVY PREIEETLYD HPGVLEAAVF
GVPDDRRGET VAAAVVTGDG ADLDEDEIEE YVLGELAPYK HPRYVEIREE LPKTGSGKVR
KTVLREEFRE AYVSG
|
|---|
| |