Gene Htur_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2215 
Symbol 
ID8742819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp2291884 
End bp2294316 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content66% 
IMG OID646512798 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003403768 
Protein GI284165489 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCGC TGGAGTTCAT CGTCGAGGAG GACCGCGAGC GAACCGTCAC GGAGATTGAG 
GGGGTCTTCG AAACCGGAAG CGCGCGACTC GAGGTGGAGC TGCTGACCAA AGGCGGCGAG
CGGATCCCTT ACGAGTTCGT CGCGGTCGGA CTCGAGAATC CCGAAGGGAA GCGCGTTCTG
GCGGGTATCG GCCGCGACGT CACCGAGCGG AAGAAACGCG ACCGGGAGCT GTCCAAGTAC
GAGACGATCG TCGAGACGAT GTCCGACGGG ATCTACGTGA AAGGCGAGGA CGGCCGGTTC
ACGATGGTCA ACGAGGCGTA CGCTCGGATG ACCGGCTACG AGCGCGAGGA ACTGGTCGGC
GAACACGCCT CCCTCGTCGT CGACGAGGCC GCGATCGAAG AGTCGAAGAA GCGACTGACG
ACGGAGCGCG AGGGAGGGGC GGATACCGAG AACCCGGCCA TGGAAGCGAA ACTGCAGCGG
CCCGACGGGG ATCGCGTTCC CGTCGAGGGA ACGTTCGCGA CGCGACGGAC GGAGGACGGC
CGACAGGAGG AGATCGGCGT CGTCCGGGAC ATCACCGAAC GGAAGCGCCG AGAACAGGAG
CGTCGACGCG TCGTGCGGGC GCTGGAGGCC GCCCGCGAAG GGATCAGCCT GCTCGACGAG
AACGGCGAGT TCATCTACGT CAACGACGCG TACGCGGAGA CGTTCCGTTA CGAGCCCGAG
GAGATGATCG GCGAACACTG GGACGACCTC GGGATCGAAG CCGATCCGTC CCGCTTCGTC
GACGACATTC TGCCGCGCAT CTCGGCGGAG GGACAGTGGT CCGGGACGAC GACCTGCGTG
CGCAGTGACG GCACCACCTT CCTCTCCCAG CACTCGCTGA CCGAGACCGA CGACGGCGAA
CTCATCTGCC TCGTTCGGGA CATCACCGAG CAACGGGAGC GCGAACGGGA TCTGCAGGCG
GTCCGAACGC AACTGGACGT CGCGACCGAA GCCGCGTCCG TCGGGATCTG GACCTGGGAC
ATTCGGGGGG ACGTCGTCAC CGCCGATGAC TATTTCGCGT CGACGTGCGG GATGGATCCG
GAACTGGCCG CCGACGGCGC GCCGATGGAC GCCTTCTACG AATCGATCCA CGAGGACGAC
CGGACCCGGA CGCGAGAGCA ACTCGAGCGC GCCGTCGAGG AGACGGGCGA ATTCGAGGCC
GAATATCGCG TTCGGGACGC GGACGGCGAC CTCGTATGGG TCGTCGCTCG CGGCGAGGTC
GAGTACGACG ACGACGGCAC CCCCGTCCGA CTGAACGGAG CGGTCTCGGA CGTTACCGAG
CTAAAACGTC GCGAACGGCA ACTCGAGGAG TCCGAACGCC GCTACCGGAC GCTGGCCGAA
CACTTCCCGA ACGGCGCGGT CGGCGTGTAC GACGAGAACT TCCGGTACAC GCTGATCGAG
GGGGCGGTCC TGGGCGACAC GCTGCCCGAG GCAGAGCAGA TGGAGAGCGA ACGAATGTCG
GCGGTCTTTC CGGACGACGT CAGCAGGCAA CTGATCCCGC TCTACCGGGC CGCCATCGAG
GACGGCGAGA CCGACAGCAC GACGATCACG TTCGACGGCG AGCACTGGCA GATCTGGGCG
GCGCCGCTAC GGGACGCCGA CGGTGAGATC TTCGCCGGGC TGAGCCTCGC ACAGGAGATC
ACCGAGCAGG TCGAACGCGA GCGACGACTC GAGGAACTGG TCGAGCGACT CGAGGAGTCC
AACGAGCGCT TAGAGCAGTT CGCCTACGCG GCCAGCCACG ACCTGCAAGA GCCCCTGCGG
ATGGTCTCGA GCTATCTCCA GTTGATCGAG AGCCGGTACA CGGACGTCTT GGACGCGGAC
GGACGGGAGT TCATCGACTT CGCGGTCGAC GGCGCCGAGC GCATGCGCGA CATGATCGAC
GGCCTGCTGG CGTACTCCCG GGTCGAGACG GGCGGCGATC CGTTCGAACC CGTCGCTCTG
GACGACGTTC TCGAAAACGC ACTCGAGGAT CTTCAGGTCC GGATCGAGGA GACGAACGCT
GAGATCACCA CCGAGGAGCT GCCGCACGTG ACGGGCGACC GCGATCAGTT GCGCCAGCTG
TTCCAGAATT TGCTGGATAA CGCCCTCGAG TACAGCGGTG ACGAGCCGCC GCGGGTCCAC
GTCTCCGCCC GGCGACGCGC GGGTAGAGAT GACCGCTGGG AGATCGCCGT CCGGGACGAG
GGGATCGGGA TCGATCCCGA CGATGCCGAC GAGATCTTCG AGGTGTTCGA GAGCCTCCAC
TCCCAGGGCG AGCACGACGG CACCGGCATC GGACTCGCGC TGTGCGAGCG GATCGTCGAG
CGCCACGGCG GCGAGATCCG ACTCGAGTCC GAGCCCGGCG AGGGGGCGAC GTTCACGGTG
ACGCTGCCGG CTGCGGACGA ACACGAGCCG TGA
 
Protein sequence
MRPLEFIVEE DRERTVTEIE GVFETGSARL EVELLTKGGE RIPYEFVAVG LENPEGKRVL 
AGIGRDVTER KKRDRELSKY ETIVETMSDG IYVKGEDGRF TMVNEAYARM TGYEREELVG
EHASLVVDEA AIEESKKRLT TEREGGADTE NPAMEAKLQR PDGDRVPVEG TFATRRTEDG
RQEEIGVVRD ITERKRREQE RRRVVRALEA AREGISLLDE NGEFIYVNDA YAETFRYEPE
EMIGEHWDDL GIEADPSRFV DDILPRISAE GQWSGTTTCV RSDGTTFLSQ HSLTETDDGE
LICLVRDITE QRERERDLQA VRTQLDVATE AASVGIWTWD IRGDVVTADD YFASTCGMDP
ELAADGAPMD AFYESIHEDD RTRTREQLER AVEETGEFEA EYRVRDADGD LVWVVARGEV
EYDDDGTPVR LNGAVSDVTE LKRRERQLEE SERRYRTLAE HFPNGAVGVY DENFRYTLIE
GAVLGDTLPE AEQMESERMS AVFPDDVSRQ LIPLYRAAIE DGETDSTTIT FDGEHWQIWA
APLRDADGEI FAGLSLAQEI TEQVERERRL EELVERLEES NERLEQFAYA ASHDLQEPLR
MVSSYLQLIE SRYTDVLDAD GREFIDFAVD GAERMRDMID GLLAYSRVET GGDPFEPVAL
DDVLENALED LQVRIEETNA EITTEELPHV TGDRDQLRQL FQNLLDNALE YSGDEPPRVH
VSARRRAGRD DRWEIAVRDE GIGIDPDDAD EIFEVFESLH SQGEHDGTGI GLALCERIVE
RHGGEIRLES EPGEGATFTV TLPAADEHEP