| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_2215 |
|---|
| Symbol | |
|---|
| ID | 8742819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 2291884 |
|---|
| End bp | 2294316 |
|---|
| Gene Length | 2433 bp |
|---|
| Protein Length | 810 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646512798 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003403768 |
|---|
| Protein GI | 284165489 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGC TGGAGTTCAT CGTCGAGGAG GACCGCGAGC GAACCGTCAC GGAGATTGAG
GGGGTCTTCG AAACCGGAAG CGCGCGACTC GAGGTGGAGC TGCTGACCAA AGGCGGCGAG
CGGATCCCTT ACGAGTTCGT CGCGGTCGGA CTCGAGAATC CCGAAGGGAA GCGCGTTCTG
GCGGGTATCG GCCGCGACGT CACCGAGCGG AAGAAACGCG ACCGGGAGCT GTCCAAGTAC
GAGACGATCG TCGAGACGAT GTCCGACGGG ATCTACGTGA AAGGCGAGGA CGGCCGGTTC
ACGATGGTCA ACGAGGCGTA CGCTCGGATG ACCGGCTACG AGCGCGAGGA ACTGGTCGGC
GAACACGCCT CCCTCGTCGT CGACGAGGCC GCGATCGAAG AGTCGAAGAA GCGACTGACG
ACGGAGCGCG AGGGAGGGGC GGATACCGAG AACCCGGCCA TGGAAGCGAA ACTGCAGCGG
CCCGACGGGG ATCGCGTTCC CGTCGAGGGA ACGTTCGCGA CGCGACGGAC GGAGGACGGC
CGACAGGAGG AGATCGGCGT CGTCCGGGAC ATCACCGAAC GGAAGCGCCG AGAACAGGAG
CGTCGACGCG TCGTGCGGGC GCTGGAGGCC GCCCGCGAAG GGATCAGCCT GCTCGACGAG
AACGGCGAGT TCATCTACGT CAACGACGCG TACGCGGAGA CGTTCCGTTA CGAGCCCGAG
GAGATGATCG GCGAACACTG GGACGACCTC GGGATCGAAG CCGATCCGTC CCGCTTCGTC
GACGACATTC TGCCGCGCAT CTCGGCGGAG GGACAGTGGT CCGGGACGAC GACCTGCGTG
CGCAGTGACG GCACCACCTT CCTCTCCCAG CACTCGCTGA CCGAGACCGA CGACGGCGAA
CTCATCTGCC TCGTTCGGGA CATCACCGAG CAACGGGAGC GCGAACGGGA TCTGCAGGCG
GTCCGAACGC AACTGGACGT CGCGACCGAA GCCGCGTCCG TCGGGATCTG GACCTGGGAC
ATTCGGGGGG ACGTCGTCAC CGCCGATGAC TATTTCGCGT CGACGTGCGG GATGGATCCG
GAACTGGCCG CCGACGGCGC GCCGATGGAC GCCTTCTACG AATCGATCCA CGAGGACGAC
CGGACCCGGA CGCGAGAGCA ACTCGAGCGC GCCGTCGAGG AGACGGGCGA ATTCGAGGCC
GAATATCGCG TTCGGGACGC GGACGGCGAC CTCGTATGGG TCGTCGCTCG CGGCGAGGTC
GAGTACGACG ACGACGGCAC CCCCGTCCGA CTGAACGGAG CGGTCTCGGA CGTTACCGAG
CTAAAACGTC GCGAACGGCA ACTCGAGGAG TCCGAACGCC GCTACCGGAC GCTGGCCGAA
CACTTCCCGA ACGGCGCGGT CGGCGTGTAC GACGAGAACT TCCGGTACAC GCTGATCGAG
GGGGCGGTCC TGGGCGACAC GCTGCCCGAG GCAGAGCAGA TGGAGAGCGA ACGAATGTCG
GCGGTCTTTC CGGACGACGT CAGCAGGCAA CTGATCCCGC TCTACCGGGC CGCCATCGAG
GACGGCGAGA CCGACAGCAC GACGATCACG TTCGACGGCG AGCACTGGCA GATCTGGGCG
GCGCCGCTAC GGGACGCCGA CGGTGAGATC TTCGCCGGGC TGAGCCTCGC ACAGGAGATC
ACCGAGCAGG TCGAACGCGA GCGACGACTC GAGGAACTGG TCGAGCGACT CGAGGAGTCC
AACGAGCGCT TAGAGCAGTT CGCCTACGCG GCCAGCCACG ACCTGCAAGA GCCCCTGCGG
ATGGTCTCGA GCTATCTCCA GTTGATCGAG AGCCGGTACA CGGACGTCTT GGACGCGGAC
GGACGGGAGT TCATCGACTT CGCGGTCGAC GGCGCCGAGC GCATGCGCGA CATGATCGAC
GGCCTGCTGG CGTACTCCCG GGTCGAGACG GGCGGCGATC CGTTCGAACC CGTCGCTCTG
GACGACGTTC TCGAAAACGC ACTCGAGGAT CTTCAGGTCC GGATCGAGGA GACGAACGCT
GAGATCACCA CCGAGGAGCT GCCGCACGTG ACGGGCGACC GCGATCAGTT GCGCCAGCTG
TTCCAGAATT TGCTGGATAA CGCCCTCGAG TACAGCGGTG ACGAGCCGCC GCGGGTCCAC
GTCTCCGCCC GGCGACGCGC GGGTAGAGAT GACCGCTGGG AGATCGCCGT CCGGGACGAG
GGGATCGGGA TCGATCCCGA CGATGCCGAC GAGATCTTCG AGGTGTTCGA GAGCCTCCAC
TCCCAGGGCG AGCACGACGG CACCGGCATC GGACTCGCGC TGTGCGAGCG GATCGTCGAG
CGCCACGGCG GCGAGATCCG ACTCGAGTCC GAGCCCGGCG AGGGGGCGAC GTTCACGGTG
ACGCTGCCGG CTGCGGACGA ACACGAGCCG TGA
|
|---|
| Protein sequence | MRPLEFIVEE DRERTVTEIE GVFETGSARL EVELLTKGGE RIPYEFVAVG LENPEGKRVL
AGIGRDVTER KKRDRELSKY ETIVETMSDG IYVKGEDGRF TMVNEAYARM TGYEREELVG
EHASLVVDEA AIEESKKRLT TEREGGADTE NPAMEAKLQR PDGDRVPVEG TFATRRTEDG
RQEEIGVVRD ITERKRREQE RRRVVRALEA AREGISLLDE NGEFIYVNDA YAETFRYEPE
EMIGEHWDDL GIEADPSRFV DDILPRISAE GQWSGTTTCV RSDGTTFLSQ HSLTETDDGE
LICLVRDITE QRERERDLQA VRTQLDVATE AASVGIWTWD IRGDVVTADD YFASTCGMDP
ELAADGAPMD AFYESIHEDD RTRTREQLER AVEETGEFEA EYRVRDADGD LVWVVARGEV
EYDDDGTPVR LNGAVSDVTE LKRRERQLEE SERRYRTLAE HFPNGAVGVY DENFRYTLIE
GAVLGDTLPE AEQMESERMS AVFPDDVSRQ LIPLYRAAIE DGETDSTTIT FDGEHWQIWA
APLRDADGEI FAGLSLAQEI TEQVERERRL EELVERLEES NERLEQFAYA ASHDLQEPLR
MVSSYLQLIE SRYTDVLDAD GREFIDFAVD GAERMRDMID GLLAYSRVET GGDPFEPVAL
DDVLENALED LQVRIEETNA EITTEELPHV TGDRDQLRQL FQNLLDNALE YSGDEPPRVH
VSARRRAGRD DRWEIAVRDE GIGIDPDDAD EIFEVFESLH SQGEHDGTGI GLALCERIVE
RHGGEIRLES EPGEGATFTV TLPAADEHEP
|
|---|
| |