Gene Htur_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2148 
Symbol 
ID8742750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp2218693 
End bp2219343 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID646512732 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003403704 
Protein GI284165425 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATAG AGGCGTCATT CACCGTTGAT CAACCCGAAT TTCCCCTGAA CGCGGTCTTC 
GAGCAACTAC CCGACGCCAC CGTCGAACTG GACCGCGTCG TCCCGACGAG CGATGCCGTT 
ATCCCCTACT TCTGGATTTA CGCGGAGCGC ATCACCGAAC TCACGCTCGA TCTGACCGGG 
GACGAGGGGG TCGACGACGT GACCGTAATC GACGAACTGG ACGAACAGCT GTTCGTCCGT 
ATCGACTGGA ACCTCGACCA CGAGAGCGTC CTCACCGCGA TCGTCGAAAC CGACGTGACC 
CTCCTCTCGG GGATCGGGAC GGCCGAGAAC TGGACGTTCG AACTCAGAAG TAGCGACCAG 
CAGGAGGTCT CCGAATTCCA GTCGTACTGT CGGAAGAACG GCATTCCGAT CCGGCTCACC 
CAACTGCACG CGCTCGCGCC GCTCGACTCG GACCGACAGT ACGATCTGAC CGACGGCCAG 
CGAACGGCGC TGATACTGGC GTACTCTCGA GGCTACTTCG ACTCACCGCG GGCCGCCACA 
CAGGCCGATC TCGCCGAGGA ACTCGAGATC AGCCATCAGG CGGTTTCGTC GCGGTTGCAA 
CGCGGTATTC GGCGGCTCGT CGCGAGCACC GTGGTAACAC CTCAGGAATG A
 
Protein sequence
MAIEASFTVD QPEFPLNAVF EQLPDATVEL DRVVPTSDAV IPYFWIYAER ITELTLDLTG 
DEGVDDVTVI DELDEQLFVR IDWNLDHESV LTAIVETDVT LLSGIGTAEN WTFELRSSDQ 
QEVSEFQSYC RKNGIPIRLT QLHALAPLDS DRQYDLTDGQ RTALILAYSR GYFDSPRAAT 
QADLAEELEI SHQAVSSRLQ RGIRRLVAST VVTPQE