| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_2128 |
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| Symbol | |
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| ID | 8742728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013743 |
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| Strand | + |
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| Start bp | 2198080 |
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| End bp | 2201259 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646512710 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003403684 |
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| Protein GI | 284165405 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCG GCCTCGAGGT TCCCGAATCG ACCCCGATAC GAGCCCTCGC GGTCGGGACG
TCGACGTGGT TGCAACGGGC GACGGCGGAG CTCGACGCCG ACGACGAGAT CACGATTCGC
GGGCCGCTCG ATCCGGCGAC CGAACTCGAA GACGCCGCCC TCAACGAGAC GGACTGCCTG
CTCACCGACG ACCGGGCGGT CCTCGAGCGC GTCGACGGGG AGTGTCCGAT CGTCTACGCG
CTCGAACCCG CCGAGGACGA GTCGATCGAT CGGCTCCGCG CCGACGGGGC GACGGACGTG
ATTCTCAAAG CCGCGGCCGA CCGATCGTCG CTGCTCGCCC ACCGTCTGCG ACGAACCGCC
GAGTTCGCCG TCAGTCACAC GGCCGGACGT CAGGAAACGC GATTGCGAGC GCTGCTCGAG
CACTCCTCGG ACGTGGTGCT CGTCGTCGAC GACGACGGCA CGGTCTCGGC CGTCGGTCCG
TCGGCGGAAG GGATCGCCGG CTACGAGCCC GACGCGCTGG TCGGTTCCCA CTATCTGGAC
TTCGTCCACC CGGACGACGT CGCGTCGATC CGAACGGCGT TCGACGACCT GTGTACCAGC
GAGCCGGGGA CGACGACGAC CGTCGAGTAC CGCTGTCAGC ACGCCGACGA CGCGTGGTAC
GTCCACGAGG CCGTGCTCAC GAATCGGCTG GCCGCCGAGA AACGCGCCGG TGGCGAGTCA
GGCGCCGAGA TAGACGGTGT CGTCGCGTCG ATCCGAGACG TGACGGCCGT CCACCGAGTC
GAGCGCGAAC TCGAGCGCTC GCTCGAACGG ATCAGCGACG CGTTCTACGC GCTCGATTCG
GAGTGGCGGT TCACGTACGT CAACGACCGG GCGGGCTCCC TCCTCGGCGT CGATCCCGCC
ACGGTGATCG GTCGCCCCAT CCTCGAGCTG TTTCCGGAGC TCCGAGAGAC GCCGTTCCGG
ACGGCCGCGG TCGAGGCGAT GGAAACCCAG GAGCCCACGT CGGTCGAACA CTATTACGAA
CCGACCGACC GCTGGTACGA CGTCCGCCTC TATCCGTCGC CGTCCGGACT CTCGGTGTAC
TTCCAGGACG TGACCGACCG GGTCGAGCGC GAACGGAAAC TGCAGGACCG GACGGAACAG
CTGGAGACGA TCATCCGGAA CGTCCCCGTC GTCCTCTTCG AACTCGACGC CGACGGGACG
ATCACGCTGG CGGAGGGGCG CGCGTTCGAG CGCAGCGAGG CGATCGCCGA CGATATCGTC
GGCGAGTCGG CGTTCGACGT CTTCGACGAC CATCCCGCGA TCCGCGCCGA CCTCAGAGCG
GCCCTCGAGG GCGTGTCGAC CCACTCCTCG ATCGAACTCG ACGACCGAGT TCTCGAACAG
TGGTGCCGGC CGATCGTCGA GGACGGCGGG GTCGACCGCG TGATCGGCAT CGCCGCCGAC
GTCACCGAAC GCGCCCAGTA TCAGACGGCG TTGAACGCCC TCCACGAGGC GACGAGCCAC
CTGCTGACCG TCGAATCGGA GCAGGCCGCC TGCGAGTACG TGGTCGACGT CGCGAACGAC
GTTCTCGACC TCGAGACGGT CGTCTATCGG TTCGACGAGC GAGAAAACGA ACTCGTGCCG
ACGGCCTACT CGTCCGGCCT CGAGTCGACG GTCGGATCGC CGCCGAGACT CCGGCCCGGC
GAGAGCCTCG CCTGGCGGGC GTTCGTCGAC GACAGCCCGG CCCGGTTCGA CGACGTCAGG
GACGCTCCGC AGGTGTTCGA CCCGACTACG GACGCTCGCA GCGGTCTCTA CGTCCCGATC
GGCGAACACG GCGTCCTCGT GGCTCTCGAT CCCGAACCGG GGCGCTACGA CGAGGAGACG
TTCGAACTCG CCACACTGTT CGCCAGAACG GCCGAGGCGG CGCTCGATCG CATCACCCGG
ACGCGCCGGC TCCACGGCCA CGAATGGGAG CTCAAGCGCC AGAACGAACA CCTCGGGCGA
CTCAACGAGG CCAGCCAGGT TCGCCAGGAT CTCGAGCAGT TGCTCCTGAT GGCCAACTCC
CGCGCCGAGA TCGAACGCGG CATCTGCGAG CGCCTCGCCG ACCTCGAGTG CTGTTCGTTC
GCCTGGATCG GCGAACCCGA TCCGGGCGGG AATCAGCTGT TACCTCGCCG ACAGGCGGGC
CACGAGCGGG AGTATCTCGA CGCGGTCTCG GTGACGACCG TCGACGACTC CGCGACCGAA
CCGGCGGGTC GAACGGCGCG GACGCGGTCG CCGGTCCTCG TCGAGAACGT CGCCGATTCG
ATCCGCGAAG GGACTTGGCG CGGCGACGCC CTCTCCAGGA GCTTCCAATC GGTCTACGCC
GTGCCGCTCG TCTACGACGA CTTCCTCTAT GGGGTCCTGA CGCTGTACAG CGACGACCGA
GACGCGTTCG ACGAACCGCT CCGGTCCATG CTCGCCGAAC TCGGCGAAAC CATCGGCTAC
TCGATCGACG CCGTCAAACG AAAGTCCCCG CTGGACGGCG AGAGCGTCCC CGTAGTCGAA
CTCGAACTCG CTCTCGAGGG ACCGAATCCG CTGGGTCGGC TCGCCGATCG ACTGGACGCG
CGCGCCGAAT TCGAGGGCGG GGCGATCCGC GACGACGGGA CGCCGACGGT GTTCGCGGTC
GTCGACGAGA CGGATGACGT CGATCCGGCC GCCCTCGCCG AACTTGAGGG AATCGGCGAC
GTCTCCGTGA TCGCCGACAC CGACTCGGAG ACGCTGTTGC AACTCCAGTA CACGGGTCCG
TTTCTCGGCG CCGCCGTCGA CGCCCACGGC GGGACGCTGC GGTCGCTAGT CGCCGACGAT
ACCGGGACGC GAGCGATCGT GGAGGTTCCG GAAACGGTCG AAGTCAGAAA CGTGCTGTCG
CAACTCAATC GCCGCGAGTT CGCGGTCTCG CTCGTCGCCC GCCGCGAGGG TTCGACGCGG
ACGCGGTCGA TGATCGACGC CGCCGCCCGT AACGCCTTAC TCGAGCAGCT GACCGATAGA
CAACGCGAGG TCGTCCAGAC GGCCTACCAC GGCGGCTTCT TCGAGTGGCC CCGGGAAACG
ACCGGGGAAT CGATCGCCGA CTCGCTTGGG ATCTCCTCCC CCGCCTTCCA GAAACACGTC
CGAGCCACCG AGAGAAAGCT CTTCACCGCG TTGTTCGACG GTCGCTCGGT AGATGGTTAA
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| Protein sequence | MNRGLEVPES TPIRALAVGT STWLQRATAE LDADDEITIR GPLDPATELE DAALNETDCL
LTDDRAVLER VDGECPIVYA LEPAEDESID RLRADGATDV ILKAAADRSS LLAHRLRRTA
EFAVSHTAGR QETRLRALLE HSSDVVLVVD DDGTVSAVGP SAEGIAGYEP DALVGSHYLD
FVHPDDVASI RTAFDDLCTS EPGTTTTVEY RCQHADDAWY VHEAVLTNRL AAEKRAGGES
GAEIDGVVAS IRDVTAVHRV ERELERSLER ISDAFYALDS EWRFTYVNDR AGSLLGVDPA
TVIGRPILEL FPELRETPFR TAAVEAMETQ EPTSVEHYYE PTDRWYDVRL YPSPSGLSVY
FQDVTDRVER ERKLQDRTEQ LETIIRNVPV VLFELDADGT ITLAEGRAFE RSEAIADDIV
GESAFDVFDD HPAIRADLRA ALEGVSTHSS IELDDRVLEQ WCRPIVEDGG VDRVIGIAAD
VTERAQYQTA LNALHEATSH LLTVESEQAA CEYVVDVAND VLDLETVVYR FDERENELVP
TAYSSGLEST VGSPPRLRPG ESLAWRAFVD DSPARFDDVR DAPQVFDPTT DARSGLYVPI
GEHGVLVALD PEPGRYDEET FELATLFART AEAALDRITR TRRLHGHEWE LKRQNEHLGR
LNEASQVRQD LEQLLLMANS RAEIERGICE RLADLECCSF AWIGEPDPGG NQLLPRRQAG
HEREYLDAVS VTTVDDSATE PAGRTARTRS PVLVENVADS IREGTWRGDA LSRSFQSVYA
VPLVYDDFLY GVLTLYSDDR DAFDEPLRSM LAELGETIGY SIDAVKRKSP LDGESVPVVE
LELALEGPNP LGRLADRLDA RAEFEGGAIR DDGTPTVFAV VDETDDVDPA ALAELEGIGD
VSVIADTDSE TLLQLQYTGP FLGAAVDAHG GTLRSLVADD TGTRAIVEVP ETVEVRNVLS
QLNRREFAVS LVARREGSTR TRSMIDAAAR NALLEQLTDR QREVVQTAYH GGFFEWPRET
TGESIADSLG ISSPAFQKHV RATERKLFTA LFDGRSVDG
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