Gene Htur_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2122 
Symbol 
ID8742722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp2193012 
End bp2193971 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID646512704 
ProductHhH-GPD family protein 
Protein accessionYP_003403678 
Protein GI284165399 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID[TIGR01084] A/G-specific adenine glycosylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGA GCGACGATGA TGCCGACGCC GGTTCGGGTA CGGGCGACGG GGACTGGTCG 
CTCCCCAACG ACCACGAGTC CGTCCGCGAG GCCCTGATCG CGTGGTACGA GGACGGCCAC 
CGCGAGTTCC CGTGGCGGCG GACCGACGAC CCCTACGAGA TCCTCGTCAG CGAGGTGATG 
AGCCAGCAGA CCCAACTGGA CCGCGTCGTC GAGGCCTGGG AAGGGTTCCT CGAGCGCTGG 
CCGACGACCG CGGCGCTGGC GGACGCCGAC CGAGCGGACG TCGTCGGCTT CTGGACGGAC 
CACAGCCTCG GCTACAACAA CCGGGCGAAG TACCTCCACG AGGCGGCCGG GCAGGTGGAA 
AACGAATACG ACGGCGAGTT CCCGACCGCG CCCGACGAAC TGCAGGAGCT CATGGGCGTC 
GGCCCCTACA CCGCCAACGC CGTGGCGAGT TTCGCCTTCA ACAACGGCGA CGCGGTCGTC 
GACACGAACG TCAAGCGTGT CGCCTACCGC GCGTTTTCGA TCCCCGACGA CGACGCGGCA 
TTCGAGGCGG CGGCGAGCGA GCTCATGCCC GACGGCGAGT CGCGAGTCTG GAACAACGCG 
ATCATGGAAC TGGGCGGCGT CGCCTGCACG CAGACACCGA AGTGTGACGA GGTCGGCTGC 
CCCTGGCGCG AGTGGTGTGA CGCCTACGCC AGCGGCGACT TCACCGCGCC GGACGTCCCG 
ACACAGCCCT CCTTCGAGGG GAGTCGCCGT CAGTTCCGCG GCCGCGTGAT CGGCACCCTG 
CGGGAGTACG ACGAACTCGA GTTGGACACC CTGGGCCATC GCATTCGCGT CGATTACGCA 
CCCGACGGCG AGTACGGACG CGAGTGGCTC ACGGGGCTGC TCGAAGACCT CGAGTCGGAC 
GGGTTAGTCG ACCTCGAGAC GGGCGAAGAC GGGGCGCTCG TGGCCCGTCT CCGTCGATAG
 
Protein sequence
MSESDDDADA GSGTGDGDWS LPNDHESVRE ALIAWYEDGH REFPWRRTDD PYEILVSEVM 
SQQTQLDRVV EAWEGFLERW PTTAALADAD RADVVGFWTD HSLGYNNRAK YLHEAAGQVE 
NEYDGEFPTA PDELQELMGV GPYTANAVAS FAFNNGDAVV DTNVKRVAYR AFSIPDDDAA 
FEAAASELMP DGESRVWNNA IMELGGVACT QTPKCDEVGC PWREWCDAYA SGDFTAPDVP 
TQPSFEGSRR QFRGRVIGTL REYDELELDT LGHRIRVDYA PDGEYGREWL TGLLEDLESD 
GLVDLETGED GALVARLRR