Gene Htur_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1960 
Symbol 
ID8742559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp2031131 
End bp2031616 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content50% 
IMG OID646512542 
ProductProtein of unknown function DUF1628 
Protein accessionYP_003403517 
Protein GI284165238 
COG category[S] Function unknown 
COG ID[COG3430] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTAC GCAAATACAG AAACAAACTT GTTGGATCGG AAGACGAGCG GGCGGTGAGC 
CCGGTCATTG GAGTTATCCT GATGGTCGCA ATAACCGTCA TTCTGGCGGC AGTCATCGCG 
GCATTCGTGC TGGATATGGG TGATGATCTC GGTAGTGAGG CTCAGGCAGG AGCACAGATG 
AGCTTTGACG AAGGAGACGG CGTGTTCTCT ACCGAACTTA CTTCCGAAGG CAATGCGGAT 
AGTTACGAGC TCCGTGGAGA TTATGTCTAC AGCACCAATG GTACCTCAGT GAGTAGCTCC 
GATTATATTG AACTTGATGG TGCTGGTGAT ACGGTGACGC TGGAGTGTGG TTCGAGCAAT 
AAATACGACG GAATAAACTA CCAACTGAAT GATTCCGCTA ATGAAAGTGG GACTGTAACA 
TTCGTCGCTT CGAACGACGG TGGCGATTCG TGGACAAACG TTGGGAGTCA GGACTGGAGT 
TGCTAA
 
Protein sequence
MDLRKYRNKL VGSEDERAVS PVIGVILMVA ITVILAAVIA AFVLDMGDDL GSEAQAGAQM 
SFDEGDGVFS TELTSEGNAD SYELRGDYVY STNGTSVSSS DYIELDGAGD TVTLECGSSN 
KYDGINYQLN DSANESGTVT FVASNDGGDS WTNVGSQDWS C