Gene Htur_1952 details

Gene Information

• Locus tag: Htur_1952
• ID: 8742551
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: -
• Start bp: 2025344
• End bp: 2026048
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 646512535
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003403510
• Protein GI: 284165231
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGTAA TGACGACGGT CGTCGAACTC GACATCCCGG CCGACCGTCT CGCGGCCGCT 
CGGTCGTTCG AACGAGTACC GGAACTCGAG TACCAGATCG GCGGGACGAT CGGTGACGCG 
CCCCCGCTGG TCTGGCTCTC CGGTCCGGAT CGGGAGACCG TCCGGGCGGC ACTCGAGACC 
GATCCCTCGA TCGACGTGAT CGCGAGCGTG ACCGACGAGA CGAAACCCGA CCGGTCGAGT 
ACCGACGAGA CCGACGACCG CGAGCGGTGG CTGTTCCGCC TCGTCTTCGG CGACCGGTTC 
AAACTCTTCG AACGGATCGT CGCAGAGAAC GGTGGGGCGA TTTTAGAGGC CAGCGGGAGT 
GCCGGATCGT GGTCGGTGAC GTTGCTCTTC CATGATCGGG ACTCGCTGTC GGCGTGTTAC 
TCGCTGTTCG AGCAGTACGA GTTCGGCGTC GACGTGACCC GTCTGACGGG GATCGACGAT 
CTGGCGAGCG CCGGGACGCC GCTCACCGAG ACCCAGTACG AGACGATCCG GACGGCCCAG 
GAGCTCGGCT ACTTCGAGGT TCCGCGCCGG ATCACGCTCA AGGAACTCGC CGCGGAACTC 
GACGTCTCAC ACCAGGCGCT GTCGGAACGG CTCCGCCGGT GTCACGCCGC GCTCGTCAGC 
GCGGAGTTGA CCGGCGAGTT GCGGCCGACC GCGATCGATC CGTAG 

 

Protein sequence

MTVMTTVVEL DIPADRLAAA RSFERVPELE YQIGGTIGDA PPLVWLSGPD RETVRAALET 
DPSIDVIASV TDETKPDRSS TDETDDRERW LFRLVFGDRF KLFERIVAEN GGAILEASGS 
AGSWSVTLLF HDRDSLSACY SLFEQYEFGV DVTRLTGIDD LASAGTPLTE TQYETIRTAQ 
ELGYFEVPRR ITLKELAAEL DVSHQALSER LRRCHAALVS AELTGELRPT AIDP