| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_1898 |
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| Symbol | |
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| ID | 8742496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013743 |
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| Strand | + |
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| Start bp | 1972827 |
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| End bp | 1974605 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646512480 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_003403456 |
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| Protein GI | 284165177 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTCG CCACGTTCGC CGACCGCGCC GCCGCGATCG AAGCCGAGCC GGCCGACCTC
GAGATCGTCG CTCGAACCAG CGAGTTGCTC GCGGACGCGG GCGACGACAG CGAGGACCGA
CGCTCCGCTG GCTCTGCGGT AGACCCGCAG ACCCTCGAGG TCGTCGCCCG GTTCGTCCAG
GGACGTGTCT TCCCGGCCTG GGACTCGACG AAACTCGACA TCGGCCCGAC GACGTGCTAC
GAGGCGATCG CCCGCGCGGC GGGGACGAAC GTGGGAAGCG ACGACGTCGA GGAGCGACTG
GCCGAGGTCG GCGAGATCGG CGAGGTGGCC GCGAGCTACG ACTTCGGCGG CCAGCAGGGA
CTCGGCGCGT TTACGGGCGG CGGTGGCGGA AACGGTGCCG GCGGCGCCGC CGGGAACGAT
CTCACGGTCC GCGAGGTCTA CGAGACGCTC GCCGACCTCG CCGCCGCGGA GGGATCGGGG
AGCCAGGACC GCAAGATCGA CCTGCTGTTC GGTCTCTTCA ATCGCTGCTC GAGCGAGGAG
GCCCGCTACC TCGCGCGACT CGTCCTCTCG GAGATGCGCA TCGGCGTCGG CGAGGGCTCC
GTCCGGGACG CGATCAGCGA GGCGTTCGAC GTACCCGTCG AGCATGTCGA GCGCGCCCTG
CAGGTCTCGA ACGACTACGG GCAGGTCGCC CGAGTCGCCC GCGACGAGGG CCGCGAGGGG
CTCGACGCGA TGGATCTCGA GGTCGGCCGG CCGGTCCAGG CGATGCTCGC TCAGGCGGGA
ACGGTGACCG ACGCGCTCGA GGAGTGGGAC GAAGCCGCCG TCGAATGGAA GTACGACGGC
GCTCGCGTGC AATTGCATCA TCGGATCGGC GATGACGGAA CTACCGAGAC CTGCGTCTTC
TCGAGAAACA TGGAGGAGGT CACCGACGCC TTCCCCGAGG TCGTCGAGTT CGCCGACGAA
ACGCTCGAGG AGCCGGCAAT CCTCGACGGC GAGGTCGTCG CGATCGACGA AGACGACGAG
CCGCTGCCGT TCCAAGAGGT ACTCAAGCGC TTCCGCCGGA AACACGACGT CGCGAAGGCC
CGCGAGGACG TGACGGTTCG GCCGGTGTTC TTCGACTGTC TGCACGCCGG CGGCGAGGAC
TTACTCGAGG AGCCGCTGAC GACGCGCCAC GAGCGGTTGC GGGCGGTGCT GGCCGATGCC
GACGATAGCA GCGACGCGAC CGTCGAGGAC GAGCGCGACA TCGAGGCCCT CTCGCTGCTC
TGGACGACCG ACGATCCCGA CGAGATCGAG GCGATCGACG CCGAGGCCCT CGAGGCGGGA
CACGAGGGGA TCATGCTCAA AGACCCCGAC TCGGCGTACT CGCCGGGCCG GCGGGGCAAA
CACTGGCGCA AGCGCAAACC CGACGTGGAG ACGCTGGACT GCGTGGTGAC CGGCGCGGAG
TGGGGCGAGG GCCGGCGCGC GACGTTCCTC GGCACCTTCG AACTCTCCGT GCGCGCGGGC
GACGACTTGG AGACCGTCGG CAAGGTCGCG ACGGGAATCA CCGACGAGAA ACTCGAGGAG
CTCACGGCGT TGCTCGAGCC CCACATCGCC ACCGAGGAGG GCCAGGCGGT GGACATAGAG
CCCGCGGTCG TCTTCGAGGT CGGCTACGAG GAGATCCAGA GCTCGCCGAC CTACTCGTCG
GGCTACGCGC TTCGCTTCCC GCGGTTCCTC GGCGTTCGCT CCGACAAGGA CCCCGACGAC
GCGGACACGC TCGAGCGCGT CGAACGGCTG CGAGCGTAG
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| Protein sequence | MEFATFADRA AAIEAEPADL EIVARTSELL ADAGDDSEDR RSAGSAVDPQ TLEVVARFVQ
GRVFPAWDST KLDIGPTTCY EAIARAAGTN VGSDDVEERL AEVGEIGEVA ASYDFGGQQG
LGAFTGGGGG NGAGGAAGND LTVREVYETL ADLAAAEGSG SQDRKIDLLF GLFNRCSSEE
ARYLARLVLS EMRIGVGEGS VRDAISEAFD VPVEHVERAL QVSNDYGQVA RVARDEGREG
LDAMDLEVGR PVQAMLAQAG TVTDALEEWD EAAVEWKYDG ARVQLHHRIG DDGTTETCVF
SRNMEEVTDA FPEVVEFADE TLEEPAILDG EVVAIDEDDE PLPFQEVLKR FRRKHDVAKA
REDVTVRPVF FDCLHAGGED LLEEPLTTRH ERLRAVLADA DDSSDATVED ERDIEALSLL
WTTDDPDEIE AIDAEALEAG HEGIMLKDPD SAYSPGRRGK HWRKRKPDVE TLDCVVTGAE
WGEGRRATFL GTFELSVRAG DDLETVGKVA TGITDEKLEE LTALLEPHIA TEEGQAVDIE
PAVVFEVGYE EIQSSPTYSS GYALRFPRFL GVRSDKDPDD ADTLERVERL RA
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