| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_1895 |
|---|
| Symbol | |
|---|
| ID | 8742493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 1968736 |
|---|
| End bp | 1970232 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646512477 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_003403453 |
|---|
| Protein GI | 284165174 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTGC GCGATCACCT CGAGGCGATC TTCAAATCGG CCGACGAACT CGACCTGACC
GAGGGCGGGA TCGCGCGGCC GCTGATCTAC CTCTCGATTC CGCTGATCAT CACGAACGTG
TTGCAGGTCA CGTACAACCT CGCGGACACG TTCTGGCTCG GCCAGCACAG CACGACGTCG
CTGGCGGCGA TCAGCTTCGC GTTCCCGATG GTCTTTTTCC TCATCGCGCT GGCGCTGGGC
GTCTCCGTCG CCGGGAGCGT CCTCGTCGCC CAGCACACCG GCGCGGACAA CCCTGAGCGA
GCGGAGTACG CCGCCTCACA GACGATCATG TACGCGATCC TCGCGTCGCT CGCGCTCGGC
GCCGTCGGCT ACGTCTTCGC CGGAGACATC CTCGCGTTGT TCGGCGCCGA GGCCGACATC
GAGCCGCTGG TCACCGCCTA CATGGAGGTC TACTCCGTCG GGCTGGTGGC CGTCTTCGGC
TTCCTCGTCT TCCTCGCGCT CATGCGGGGG TACGGCGACA CCGTCACGCC GATGCTCGTC
ATGTTCGGCT CGGTCGTACT CAACATCGTC CTCGACCCGT TCCTCATCTT CGGGTTCGAG
GGCAACCCGC TGTTCGGCTA CCTCGGTCTC CGCGGCCTCG AGGGCGAGCT GCTCGCCGCC
ACCGGCTACG CCGGGTCGGG GATCGAGGGC GCCGCGATCG CGACCGTCTT CTCGCGGGCG
CTGGCCTTCG CCGTCGGCCT CGCGATCATG TTCCGGGGCA CGCACGGCGT CCGGATCCGC
CTCTCGCAGA TGAAACCCGA CCTCGAGTAC GCGCGGAAAC TCGTCGAGAT CGGGACGCCG
GCGTCGGTCG AGGGGACCGC ACGGGCCCTC TCGATCAACC TGCTGTTGGT CATCATCGCG
ATGTTCCCCG AGACGGTCGT CGCCGCCTTC GGGATCGGGA CCCGCGTGTT CTCGGTGATC
TTCCTCCCCG CGATCGCCTT CTCTCAGGGA ATCGAGACGA TGACCGGCCA GAACATCGGC
GCCGGGAAAC GGGAGCGCGC CGAGCGGACG AACCACTTCG GCGCGAAGGT CATGCTGGTC
ACGCTCACGG GCCTCGGCGC CGTGGTCTTC CTGGCCGCCG CGCCGATCGT CTCGGTGTTC
ACGACCGACG CCGCGGTCGT CGCCGAGGGC GCGACCTTTC TCCGCTATAC GGCCCTGACG
TTCGGCTTTA TGGGCGTGAT GCGGGCCTAT AGCGGCGGAT TCCGCGGGGC CGGCAAGACG
CTTATCGCCG CGGCGATTTC CGTGCTCACT CTCGGCGTGA TCCGCTTCCC GCTCGCGTGG
TTCGGAGCCC AAGCCGTCGG CTCGAACGGC GTCTGGGCCG CATTCGCGGT CTCGACCGTG
ATCGGCGGCG TGATCGCCTA CGCCTGGTTC AACTGGGGCG ACTGGCTCGA TTCGGCGTCG
GTCGAAACCG GCGCCGCGGT CGGCGCCGAG AGCAGCGGGA GCGTCGGCGA CGACTGA
|
|---|
| Protein sequence | MTVRDHLEAI FKSADELDLT EGGIARPLIY LSIPLIITNV LQVTYNLADT FWLGQHSTTS
LAAISFAFPM VFFLIALALG VSVAGSVLVA QHTGADNPER AEYAASQTIM YAILASLALG
AVGYVFAGDI LALFGAEADI EPLVTAYMEV YSVGLVAVFG FLVFLALMRG YGDTVTPMLV
MFGSVVLNIV LDPFLIFGFE GNPLFGYLGL RGLEGELLAA TGYAGSGIEG AAIATVFSRA
LAFAVGLAIM FRGTHGVRIR LSQMKPDLEY ARKLVEIGTP ASVEGTARAL SINLLLVIIA
MFPETVVAAF GIGTRVFSVI FLPAIAFSQG IETMTGQNIG AGKRERAERT NHFGAKVMLV
TLTGLGAVVF LAAAPIVSVF TTDAAVVAEG ATFLRYTALT FGFMGVMRAY SGGFRGAGKT
LIAAAISVLT LGVIRFPLAW FGAQAVGSNG VWAAFAVSTV IGGVIAYAWF NWGDWLDSAS
VETGAAVGAE SSGSVGDD
|
|---|
| |