Gene Htur_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1843 
Symbol 
ID8742437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand
Start bp1918696 
End bp1919937 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content62% 
IMG OID646512421 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_003403401 
Protein GI284165122 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAG ACGACGATCG AGACCCGCTC TTTCGGTACG ACGATCCGGT CTTCGCCGAC 
GAGCGCCTGC TCGAGATTAC GCACCTGCCC GGTCCGGATC GGATCGTCGG GCGCGACGAG
CAGATGCAAC GGGTTGCGGA CGCCCTGAAC CCGGCTATTT TCGGGAGCGA ACCCAACCAC
CTGTTCATCT TCGGCAAGAC CGGCACCGGC AAATCACTCA TTTCCCGTTC GATCACCCAG
CGGGTGATTT CCGAAGCACA GCGCGACGAC ATCACCGTCA AGTACGCCTT CATCGACTGT
GGCGAGCAAA ACACCGAGGC GTCGATCGTG AAGACGATCG CTCAGATCGT CAACGAGCCC
GATCGGAGCG GCATCTCCGT CCCTGATCGC GGCCTCGGCA CCGGTGACTA CTACAAGCGA
CTCTGGCAGG CGATCGATCA CTGCACCGAC GTCACCATCG TCATCCTAGA CGAGATCGAT
ATGCTCGAGG ACGACGAAGT CCTCCGGAAA CTCTCTCGCG CGGGGGAAAA CCGGCGGATC
TCGGACTCGA GTATCGGTAT CATCGGCATC TCCAACAAGA TCGACTTTCC CGACCACCTC
TCGGAACGCG TCAAATCCAG TCTCTCCCGC GACGAACTCG TCTTCTCGCC GTACGACGCC
AACCAGCTGG TCGAAATCTT GGAGAAACGT CGCGACGCCT TCCACGACGG CGTGCTCTCG
GACGACGTCA TTCCCCTCAC GGCGGCGCTG GCGGCCCAGG AACACGGCGA CGCACGCAAG
GCGATCGACA TCCTCCGCAA CGCCGGTCGC ATCGCGAAGA AACAGAACGC GACGCGGGTC
ACTGCCGATC ACGTCCGCGA CGCCAAGGAG AAGACCGAGG CCGATCGCTT CAACGAACTC
ATCGAGGGCT CGCCCCAGCA GGCCAAGGCG ATCCTCTACT CGCTGACGCT GCTGACCGAG
AACAGCACGG AAAAGGAGTT CCCGACGAAG ATCATCTACA ACCAGTACAA GGAGGTCGCG
CGGCAACTCG ACTTCGACGT GCTCTCCGAG CGGCGCGTCC AGGAGATCCT CCAGGAGCAG
AACTTCCTCA ACGTCATCCA GTCCGAACGC GAGGGTCGCG GACGCGGCCG CGGCGCCCAC
GCCAAACACC GACTGCTCGA GAACCCCTCG ATCGTCAAGA AGGTACTCCT GCGGGACTCG
CGGCTGGCCG TCCTCGAGGA CGACGGGGGC GAGGCCACGT AG
 
Protein sequence
MSADDDRDPL FRYDDPVFAD ERLLEITHLP GPDRIVGRDE QMQRVADALN PAIFGSEPNH 
LFIFGKTGTG KSLISRSITQ RVISEAQRDD ITVKYAFIDC GEQNTEASIV KTIAQIVNEP
DRSGISVPDR GLGTGDYYKR LWQAIDHCTD VTIVILDEID MLEDDEVLRK LSRAGENRRI
SDSSIGIIGI SNKIDFPDHL SERVKSSLSR DELVFSPYDA NQLVEILEKR RDAFHDGVLS
DDVIPLTAAL AAQEHGDARK AIDILRNAGR IAKKQNATRV TADHVRDAKE KTEADRFNEL
IEGSPQQAKA ILYSLTLLTE NSTEKEFPTK IIYNQYKEVA RQLDFDVLSE RRVQEILQEQ
NFLNVIQSER EGRGRGRGAH AKHRLLENPS IVKKVLLRDS RLAVLEDDGG EAT